Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00417
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122212-1|AAM52724.1|  658|Drosophila melanogaster LP07906p pro...    34   0.23 
AE014296-3604|AAF51767.2|  706|Drosophila melanogaster CG32447-P...    34   0.23 
AE014296-3603|AAS65094.1|  658|Drosophila melanogaster CG32447-P...    34   0.23 
AY075423-1|AAL68239.1| 1006|Drosophila melanogaster LD43687p pro...    27   1.6  
AJ243811-1|CAB51031.1| 1006|Drosophila melanogaster l(3)70Da pro...    27   1.6  
AE014296-2356|AAF49760.1| 1006|Drosophila melanogaster CG6760-PA...    27   1.6  

>AY122212-1|AAM52724.1|  658|Drosophila melanogaster LP07906p
           protein.
          Length = 658

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 224 LLFACLLVCCIFLFSINSTTWVKTPFNPIFVIY 322
           L+FA LLV C+FL S+N   ++  P+  + +++
Sbjct: 263 LVFAALLVKCVFLISLNGGVYLPAPYQGLLLLF 295


>AE014296-3604|AAF51767.2|  706|Drosophila melanogaster CG32447-PA,
           isoform A protein.
          Length = 706

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 224 LLFACLLVCCIFLFSINSTTWVKTPFNPIFVIY 322
           L+FA LLV C+FL S+N   ++  P+  + +++
Sbjct: 263 LVFAALLVKCVFLISLNGGVYLPAPYQGLLLLF 295


>AE014296-3603|AAS65094.1|  658|Drosophila melanogaster CG32447-PB,
           isoform B protein.
          Length = 658

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 224 LLFACLLVCCIFLFSINSTTWVKTPFNPIFVIY 322
           L+FA LLV C+FL S+N   ++  P+  + +++
Sbjct: 263 LVFAALLVKCVFLISLNGGVYLPAPYQGLLLLF 295


>AY075423-1|AAL68239.1| 1006|Drosophila melanogaster LD43687p
           protein.
          Length = 1006

 Score = 27.1 bits (57), Expect(2) = 1.6
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 253 HISFFN*LNNLGKNT--IQPNIRNLSTSCIK 339
           H  FF+   + G+ T  IQ ++RN+ TSC++
Sbjct: 509 HFEFFHGSRSKGRKTESIQKDLRNIFTSCLQ 539



 Score = 22.6 bits (46), Expect(2) = 1.6
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 10  LIQLHRLLSWLRWFTV*ILFIRYKEAFKPIYTYP-SETGKASEPPIHPIKVINFSGHHRH 186
           L+ +  L    R+  V   F++  + +      P  E  K   PP  P+ V +      +
Sbjct: 392 LVTVGILPEHFRYCVVDAQFLKESKIYAADLVRPVGEIIKEETPPTSPLSVQDLIQLPEY 451

Query: 187 LKFLHQTRQLIKTSICVS 240
            K + Q  Q ++ ++C+S
Sbjct: 452 DKIVDQVVQELRMNLCLS 469


>AJ243811-1|CAB51031.1| 1006|Drosophila melanogaster l(3)70Da
           protein.
          Length = 1006

 Score = 27.1 bits (57), Expect(2) = 1.6
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 253 HISFFN*LNNLGKNT--IQPNIRNLSTSCIK 339
           H  FF+   + G+ T  IQ ++RN+ TSC++
Sbjct: 509 HFEFFHGSRSKGRKTESIQKDLRNIFTSCLQ 539



 Score = 22.6 bits (46), Expect(2) = 1.6
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 10  LIQLHRLLSWLRWFTV*ILFIRYKEAFKPIYTYP-SETGKASEPPIHPIKVINFSGHHRH 186
           L+ +  L    R+  V   F++  + +      P  E  K   PP  P+ V +      +
Sbjct: 392 LVTVGILPEHFRYCVVDAQFLKESKIYAADLVRPVGEIIKEETPPTSPLSVQDLIQLPEY 451

Query: 187 LKFLHQTRQLIKTSICVS 240
            K + Q  Q ++ ++C+S
Sbjct: 452 DKIVDQVVQELRMNLCLS 469


>AE014296-2356|AAF49760.1| 1006|Drosophila melanogaster CG6760-PA
           protein.
          Length = 1006

 Score = 27.1 bits (57), Expect(2) = 1.6
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 253 HISFFN*LNNLGKNT--IQPNIRNLSTSCIK 339
           H  FF+   + G+ T  IQ ++RN+ TSC++
Sbjct: 509 HFEFFHGSRSKGRKTESIQKDLRNIFTSCLQ 539



 Score = 22.6 bits (46), Expect(2) = 1.6
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 10  LIQLHRLLSWLRWFTV*ILFIRYKEAFKPIYTYP-SETGKASEPPIHPIKVINFSGHHRH 186
           L+ +  L    R+  V   F++  + +      P  E  K   PP  P+ V +      +
Sbjct: 392 LVTVGILPEHFRYCVVDAQFLKESKIYAADLVRPVGEIIKEETPPTSPLSVQDLIQLPEY 451

Query: 187 LKFLHQTRQLIKTSICVS 240
            K + Q  Q ++ ++C+S
Sbjct: 452 DKIVDQVVQELRMNLCLS 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,009,020
Number of Sequences: 53049
Number of extensions: 610795
Number of successful extensions: 980
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)