Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00416
(754 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 119 7e-26
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 116 8e-25
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 103 4e-21
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 99 6e-20
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 73 1e-11
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 69 2e-10
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 69 2e-10
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 68 3e-10
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 67 4e-10
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 66 9e-10
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 64 5e-09
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 52 1e-05
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 2e-05
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 52 2e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 50 8e-05
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 40 0.050
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 36 0.81
UniRef50_Q8VHD8 Cluster: Hornerin; n=6; Mus musculus|Rep: Horner... 34 4.3
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 119 bits (287), Expect = 7e-26
Identities = 51/59 (86%), Positives = 58/59 (98%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGF 59
Score = 116 bits (280), Expect = 5e-25
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = +3
Query: 258 VAKGATYGKPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 437
V KG TYGKPKSHGVNQLKP R L+SIAEE +SYW+AQD+SYKYFEVIL
Sbjct: 75 VPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVIL 134
Query: 438 VDPSHKAIRRDPKINWI 488
+D H AIRRDPKINWI
Sbjct: 135 IDTHHSAIRRDPKINWI 151
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +2
Query: 509 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
RE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 159 RELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 116 bits (278), Expect = 8e-25
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQGY
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGY 59
Score = 101 bits (243), Expect = 1e-20
Identities = 46/77 (59%), Positives = 55/77 (71%)
Frame = +3
Query: 258 VAKGATYGKPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 437
V KGATYGKP HGVNQLK R+L+S+AEE +SYWV +DS+YK+FEVIL
Sbjct: 75 VPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVIL 134
Query: 438 VDPSHKAIRRDPKINWI 488
+DP HKAIRR+P WI
Sbjct: 135 IDPFHKAIRRNPDTQWI 151
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +2
Query: 509 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
REMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 159 REMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 103 bits (248), Expect = 4e-21
Identities = 42/59 (71%), Positives = 53/59 (89%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQG+
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGF 59
Score = 95.9 bits (228), Expect = 9e-19
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = +3
Query: 258 VAKGATYGKPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 437
V KG TYGKPK+HGVN+LK ++ +++AE +SYWVA+DS+YK++EV+L
Sbjct: 75 VCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVL 134
Query: 438 VDPSHKAIRRDPKINWI 488
+DP HKAIRR+P WI
Sbjct: 135 IDPFHKAIRRNPDTQWI 151
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +2
Query: 509 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
RE RGLTSAGR SRGLGKG R+S T+GGS+ W R+NT RKR
Sbjct: 159 REQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 99 bits (238), Expect = 6e-20
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +GY
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNEGY 59
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQG
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQG 55
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 512 EMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 646
E+ GLTSAG RGL GKGH + + + S RA W R T+ LRR R
Sbjct: 393 ELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438
Score = 35.5 bits (78), Expect(2) = 6e-04
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 423 FEVILVDPSHKAIRRDPKINWI 488
FE+ILVD +H AIR D +INW+
Sbjct: 363 FEIILVDVAHSAIRDDLRINWL 384
Score = 30.7 bits (66), Expect(2) = 6e-04
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 258 VAKGATYGKPKSHGVNQLKPTRNLKS 335
V KG Y KPK G+ QLK RN ++
Sbjct: 334 VPKGIVYSKPKHQGITQLKFQRNKRT 359
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+PK GV + + NL+ +AE+ SYWV +D+ YK+FEV+++DPSH AI
Sbjct: 81 RPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPSHPAI 140
Query: 462 RRDPKINWIV 491
R DP W+V
Sbjct: 141 RNDPDYAWVV 150
Score = 56.0 bits (129), Expect = 9e-07
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQG
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQG 58
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
KP G + P ++L+ IAEE +SYWV +D YK+FEVI+VDP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 462 RRDPKINWI 488
+ DPKI WI
Sbjct: 141 KSDPKIAWI 149
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQGY
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGY 59
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+ K GVN++ +NL+ IAEE +SYWV +D S K+FE IL+DP H AI
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142
Query: 462 RRDPKINWI 488
+ D +NWI
Sbjct: 143 QNDDDLNWI 151
Score = 40.7 bits (91), Expect = 0.038
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 46 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQG
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQG 60
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+PK GV P ++ + IAEE +SYWVA+D Y+++EVILVDP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162
Query: 462 RRDPKINWI 488
DP++ WI
Sbjct: 163 CSDPELKWI 171
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 25 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 204
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 205 QG 210
QG
Sbjct: 79 QG 80
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 66.1 bits (154), Expect = 9e-10
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = -3
Query: 509 VLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLSNGF 330
VL+ DP+ +R++++ + ++EDNL+ + I NPV Q +FLSN
Sbjct: 24 VLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRL 83
Query: 329 KVARGLQLVDTMALGLAISGTLSNCRLRPPR--RTRILNTT*PCLAR*PSLRALSGLVGL 156
K + +QLV+T+ LAIS TL + +TT L PS LSG +G
Sbjct: 84 KASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLVSQPS---LSGWMGW 140
Query: 155 GARCIRVN*RYCHTLTRNKKRITSLSFFLYNS 60
GA N +YC T +K I S FFL++S
Sbjct: 141 GALYSAENWQYCQQWTLRRKHIMSDCFFLHSS 172
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+PK GV P++ + IAEE SY+VA+D YKY+EVI+VD SH I
Sbjct: 81 RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVI 140
Query: 462 RRDPKINWI 488
R DP++ W+
Sbjct: 141 RSDPELKWL 149
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQG+
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGF 59
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+PK GV ++K ++K +A SY+V +D +Y +FEVIL DPSH +
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRV 137
Query: 462 RRDPKINWIVNA 497
+DP++ V A
Sbjct: 138 AKDPELRDRVGA 149
Score = 39.5 bits (88), Expect = 0.087
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 103 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
+R RV +R+ + R RPTR D+AR LGY+AKQG
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQG 55
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 462 RRDPKIN 482
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+PK GV + ++ + +AEE +SYWVA D Y+YFEVIL+D + I
Sbjct: 83 RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTI 142
Query: 462 RRDP 473
+ DP
Sbjct: 143 KNDP 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +1
Query: 43 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQG
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQG 60
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLKSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 461
+PK GV ++K N+K++AE SY++ +D + +FEVIL DP H +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176
Query: 462 RRDPKI 479
+D ++
Sbjct: 177 AQDKEL 182
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 103 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
LR RV +R+ + R +P+R +ARRLGY+AKQG
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQG 94
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 40.3 bits (90), Expect = 0.050
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = -3
Query: 509 VLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 393
VL++ + DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 470 VLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = -3
Query: 509 VLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLSNGF 330
VL+ DP+ +RI+++ + ++EDNL + I NPVR Q + L NG
Sbjct: 45 VLVEWFDDPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLCNGL 104
Query: 329 KVARGL 312
K + L
Sbjct: 105 KASSKL 110
>UniRef50_Q8VHD8 Cluster: Hornerin; n=6; Mus musculus|Rep: Hornerin
- Mus musculus (Mouse)
Length = 2496
Score = 33.9 bits (74), Expect = 4.3
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 428 GYPRGPVTQGHSSRS*DQLDRECCT*AREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAA 607
G+P+ QG SS S + EC + G +S G + G G + Y + GSR ++
Sbjct: 201 GFPQPGSEQGQSSSSSTKGSGECYSSGNGKHGSSSGGSAVSGSGHSNTYGKQGTGSRHSS 260
Query: 608 WLRRN 622
RR+
Sbjct: 261 SNRRS 265
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,781,130
Number of Sequences: 1657284
Number of extensions: 14766363
Number of successful extensions: 36426
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 35145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36412
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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