Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00415
(309 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 151 2e-36
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 145 1e-34
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 137 4e-32
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 125 2e-28
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 83 2e-15
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 81 6e-15
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 80 1e-14
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 79 3e-14
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 78 3e-14
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 78 4e-14
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 77 1e-13
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 77 1e-13
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 76 1e-13
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 74 5e-13
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 74 5e-13
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 70 1e-11
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 66 2e-10
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 59 2e-08
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 59 2e-08
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 53 1e-06
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 50 1e-05
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 48 3e-05
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 45 4e-04
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 37 0.10
UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8... 34 0.54
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 33 0.94
UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|R... 33 1.6
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 32 2.2
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 32 2.9
UniRef50_Q2XNF8 Cluster: Nonribosomal peptide synthetase-polyket... 31 5.0
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_A0X5X1 Cluster: Flp pilus assembly protein ATPase CpaE-... 31 6.6
UniRef50_Q6IHQ1 Cluster: HDC01725; n=1; Drosophila melanogaster|... 30 8.8
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 151 bits (367), Expect = 2e-36
Identities = 65/84 (77%), Positives = 77/84 (91%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
R++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 95 RKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 154
Query: 182 HRLTKEDAMKWFQQKYDGIILNSK 253
HR++KE+AM+WFQQKYDGIIL K
Sbjct: 155 HRISKEEAMRWFQQKYDGIILPGK 178
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 145 bits (352), Expect = 1e-34
Identities = 68/102 (66%), Positives = 84/102 (82%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
R++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++A ++R+TG +G
Sbjct: 149 RKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAK 208
Query: 182 HRLTKEDAMKWFQQKYDGIILNSKESKIXXK*K**NSKKKKK 307
HR++KE+AM+WFQQKY GIIL K + I K + KK+K+
Sbjct: 209 HRISKEEAMRWFQQKYAGIILPGKINLI-QKANIFSEKKRKR 249
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 137 bits (332), Expect = 4e-32
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +2
Query: 5 RDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPH 184
R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RPG+ VA RRR +VG H
Sbjct: 95 RRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQH 154
Query: 185 RLTKEDAMKWFQQKYDGIILNSKES 259
R+TK+DAMKWFQ KY+G+ILN ++
Sbjct: 155 RVTKDDAMKWFQVKYEGVILNKSQN 179
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 125 bits (302), Expect = 2e-28
Identities = 55/82 (67%), Positives = 64/82 (78%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
R NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFYVV+ RPG V R+R G VG
Sbjct: 92 RDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNS 151
Query: 182 HRLTKEDAMKWFQQKYDGIILN 247
H+ TKED + WF+QKYD +L+
Sbjct: 152 HKTTKEDTVSWFKQKYDADVLD 173
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 82.6 bits (195), Expect = 2e-15
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 26 GNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKED 202
G F FGI EHIDL G+ YDP +GI+G+D V L R G+ VA RRRK K+ HR+TKED
Sbjct: 106 GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKED 165
Query: 203 AMKWFQ 220
++W +
Sbjct: 166 TIRWLE 171
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 80.6 bits (190), Expect = 6e-15
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +2
Query: 11 NFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHR 187
NF +GN FGI ++ D KYDP IGIYG+D VVL RPG V+ RRR+ KVG HR
Sbjct: 88 NFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVLERPGHRVSRRRRRGVKVGVEHR 147
Query: 188 LTKEDAMKWFQQKY 229
+ K+++ WF+ ++
Sbjct: 148 VGKDESKAWFKDQF 161
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGF 178
+ +F+ G FGFGI E+I + G+KYDP +G+ GL+ YV L RPG+ V RR K KVG
Sbjct: 89 KASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAYVTLERPGYRVERRRIKRSKVGS 147
Query: 179 PHRLTKEDAMKWFQQK 226
HRL KE+ +KW Q++
Sbjct: 148 RHRLNKEEIIKWAQEE 163
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGF 178
+ +F GN GFGI+EHI + G +YDP +GI+G+D + + RPG+ VA RRR K+
Sbjct: 116 KASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIERPGYRVARRRRARSKIPR 175
Query: 179 PHRLTKEDAMKWFQQKY 229
HR+TKE++M + +++
Sbjct: 176 RHRVTKEESMVFLAKEF 192
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGF 178
R ++F+A GN FGI+EHI + G +YDP++GI+G D V L RPGF V +RRR VG
Sbjct: 115 REESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVAVTLARPGFRVQYRRRARADVGK 173
Query: 179 PHRLTKEDAMKWFQ 220
HR+++E+ +++FQ
Sbjct: 174 DHRVSREETIRFFQ 187
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 77.8 bits (183), Expect = 4e-14
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 FSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRL 190
F A GN FGI+EHID+ G+KY+P IGI+G++ V +PG+ +A RR + KV HR+
Sbjct: 91 FDAQGNLSFGIKEHIDIPGMKYNPDIGIFGMNVSVTFEKPGYRIAKRRIQQKKVPAKHRI 150
Query: 191 TKEDAMKWFQQKYD 232
+KE+ MK+ + ++
Sbjct: 151 SKEETMKYMEDNFN 164
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 RDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
R F + GN FGI+EH D G++YDP+IG++G+D VVL RPG + RR T K+
Sbjct: 89 RAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIATRKIPTD 148
Query: 182 HRLTKEDAMKWFQQKY 229
HR+T +DA+ + + Y
Sbjct: 149 HRVTVDDAIAFLNESY 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 RDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
R F + GN FGI+EH D G+KYDP+IG++G+D VV+ RPG + RR T K+
Sbjct: 89 RSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGMDVTVVIKRPGERICKRRIATRKIPTN 148
Query: 182 HRLTKEDAMKWFQQKY 229
HR+T ED++ + Y
Sbjct: 149 HRVTLEDSIAFLNDSY 164
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 11 NFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHR 187
+F GNF FG+ EHID G KYDPS+GIYG+D V + G+ V R+ K + H
Sbjct: 101 SFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHL 160
Query: 188 LTKEDAMKWFQQKYD 232
+TK++A+++ Q K+D
Sbjct: 161 VTKDEAIEYIQAKFD 175
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 74.1 bits (174), Expect = 5e-13
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 11 NFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHR 187
+F GNF FGI EHID+ GIKYDP IGI GLD + L RPG+ + R + +VG HR
Sbjct: 91 SFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCMTLSRPGYGIRKRSKHKARVGRSHR 150
Query: 188 LTKEDAMKWFQQKY 229
+T +A + +++
Sbjct: 151 ITATEAKDFVVREF 164
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 74.1 bits (174), Expect = 5e-13
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 FSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRL 190
F TGNF FG++EH + +YDPSIGIYGLD V L RPG+ VA R + + + HRL
Sbjct: 99 FDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRL 158
Query: 191 TKEDAMKWFQQKYD 232
DA+ + + YD
Sbjct: 159 NPADAVAFIESTYD 172
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 8 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPH 184
DNF GN+ FGI+EHID+ G+KY+PSIGI GL V L RPG+ + R + VG H
Sbjct: 97 DNF---GNYSFGIREHIDIPGVKYEPSIGILGLGISVTLTRPGYGIRTRSKHKASVGKSH 153
Query: 185 RLTKEDAMKWFQQKY 229
+T ++A + +++
Sbjct: 154 IITSQEAKDYLVKEF 168
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 65.7 bits (153), Expect = 2e-10
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +2
Query: 26 GNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRR-KTGKVGFPHRLTKE 199
GN FGI+EHI + G+KYDP +GI G+D + + RPG + RRR + G + HR+T+E
Sbjct: 118 GNVSFGIEEHILIPGVKYDPRVGILGMDVAITIQRPGHRIVERRRQRRGHIPRRHRVTRE 177
Query: 200 DAMKWFQQKY 229
+ M Q +
Sbjct: 178 ETMVLLNQLF 187
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 58.8 bits (136), Expect = 2e-08
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVG 175
++ NFS +GNFGFGIQEHIDLG+KYDP GI+ + + ++ K K+G
Sbjct: 122 KKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLLCCVVKTRIESCSKKIKKFKIG 179
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 11 NFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVL-GRPGFNVAHRRRKTGKVGFPH 184
+F GN FGI ++ D G+KYDP IGI+G+D +V R G+ + RR K +
Sbjct: 95 SFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKM 154
Query: 185 RLTKEDAMKWFQQKYD 232
R++KE+ +K+ Q+ ++
Sbjct: 155 RISKEETIKYLQENFN 170
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 52.8 bits (121), Expect = 1e-06
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = -3
Query: 235 TIIFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVN 56
+I+ LLEP +FL V + F + S TW +V++ ++N++ +VLDTQ++
Sbjct: 10 SIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLDTQID 69
Query: 55 VFLNTEAKITRGGEV 11
VFL+TE ++T EV
Sbjct: 70 VFLDTETEVTGSREV 84
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 11 NFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 169
NFS T FG GI +H++LG +D IGI+G++ L R G+ + ++ + K
Sbjct: 87 NFSLTSTFGIGISDHLELGYNFDQKIGIHGINIIGDLSRRGYRIKLKKEQDPK 139
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 48.4 bits (110), Expect = 3e-05
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -3
Query: 247 IKYDTIIFLLEPLHSIFLCEAVGKSHFSCL-TPSVCYVETWPAKYDVKVQSINSN*GIVL 71
++ D + LLEP H I L + V + L TP+V V ++DV++ +++ +VL
Sbjct: 35 VQDDALERLLEPSHRISLGKLVLLTDLLLLLTPAVDSVAR-ALQHDVEIHTVDPCGRVVL 93
Query: 70 DTQVNVFLNTEAKITRGGEV 11
D +VNVF +TE ++TRG EV
Sbjct: 94 DAEVNVFADTETEVTRGAEV 113
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 149 RRRKTGKVGFPHRLTKEDAMKWFQQKYDGII 241
RRR + F HR+TK+DAMKWFQ KY+G+I
Sbjct: 18 RRRCRLVLVFQHRVTKDDAMKWFQVKYEGVI 48
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = -3
Query: 160 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGE 14
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGE 111
>UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8),
putative; n=8; Trypanosomatidae|Rep: GPI-anchor
transamidase subunit 8 (GPI8), putative - Leishmania
major
Length = 357
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 244 KYDTIIFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 113
+Y ++F+ + H+I LCE V + CL S E++ +YD
Sbjct: 213 RYGRVVFMADTCHAIALCEHVEAPNVVCLAASDAESESYSCQYD 256
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 33.5 bits (73), Expect = 0.94
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 99 DWTFTSYLAGQVST*HTEGVRQEKWDFPTASQRKML 206
DWTFT++ G V+ E ++EKWDF S +K L
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKKSL 416
>UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|Rep:
Chitinase - Monochamus alternatus (Japanese pine sawyer)
Length = 371
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 211 LHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 113
L S+ +C AV HF+ T +CY E+W A YD
Sbjct: 3 LKSLLICLAVFIQHFAAGTKVICYYESWNA-YD 34
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 FSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
F GN+ FGI+EHI + +D I GLD VV+ N H K+ FP
Sbjct: 123 FDKFGNYTFGIKEHIIFPEVNFDRIDKIRGLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 5 RDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 118
R+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 118 RNGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
>UniRef50_Q2XNF8 Cluster: Nonribosomal peptide synthetase-polyketide
synthase hybrid; n=5; Bacteria|Rep: Nonribosomal peptide
synthetase-polyketide synthase hybrid - Lysobacter
lactamgenus
Length = 5049
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 127 PAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVV 8
P K+D+++ + S G+VLD + N L EA I R EV+
Sbjct: 459 PVKFDLQLDAFPSAEGLVLDWRYNRSLFDEASIARMAEVM 498
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 2 RRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGKVG 175
++D + T + F +++ D+ +YD IG ++G+ G PG +AH R + G
Sbjct: 238 KKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTVKG 297
Query: 176 F 178
F
Sbjct: 298 F 298
>UniRef50_A0X5X1 Cluster: Flp pilus assembly protein ATPase
CpaE-like; n=1; Shewanella pealeana ATCC 700345|Rep: Flp
pilus assembly protein ATPase CpaE-like - Shewanella
pealeana ATCC 700345
Length = 408
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 18 PPRVILASVFKNTLTWVSSTIPQLEFMDWTFTSYLAGQVS 137
P + ++AS TLTW++ ++ Q E + W ++Y Q++
Sbjct: 25 PVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYEDDQLA 64
>UniRef50_Q6IHQ1 Cluster: HDC01725; n=1; Drosophila
melanogaster|Rep: HDC01725 - Drosophila melanogaster
(Fruit fly)
Length = 102
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 237 IPSYFCWNHFIASSFVRRWGNPTFPVLRLL 148
IP++ WN+ + + GNP FP L+LL
Sbjct: 51 IPTHSRWNYAVPGEAIPTIGNPDFPPLQLL 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,927,464
Number of Sequences: 1657284
Number of extensions: 5767730
Number of successful extensions: 14441
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 14199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14429
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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