Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00415
         (309 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal prot...   171   1e-43
BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p pro...   171   1e-43
AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p pro...   171   1e-43
AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA...   171   1e-43
BT024303-1|ABC86365.1|  142|Drosophila melanogaster IP12083p pro...    27   4.7  
AE014297-3651|AAN14023.1|  542|Drosophila melanogaster CG31105-P...    27   4.7  
BT011097-1|AAR82763.1|  871|Drosophila melanogaster RE21038p pro...    27   6.2  
AF104355-1|AAD08705.1|  844|Drosophila melanogaster PIWI protein.      27   6.2  
AF104354-1|AAD08704.1|  843|Drosophila melanogaster PIWI protein.      27   6.2  
AE014134-2002|AAF53043.1|  843|Drosophila melanogaster CG6122-PA...    27   6.2  
BT024964-1|ABE01194.1|  405|Drosophila melanogaster IP15271p pro...    26   8.2  
AY128474-1|AAM75067.1| 1113|Drosophila melanogaster RE32455p pro...    26   8.2  
AY051434-1|AAK92858.1|  955|Drosophila melanogaster GH10726p pro...    26   8.2  
AJ309488-1|CAC83725.1|  793|Drosophila melanogaster chitin synth...    26   8.2  
AF227729-1|AAG09735.1|  997|Drosophila melanogaster chitin synth...    26   8.2  
AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,...    26   8.2  
AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,...    26   8.2  
AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,...    26   8.2  

>U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal protein
           DL11 protein.
          Length = 184

 Score =  171 bits (416), Expect = 1e-43
 Identities = 75/85 (88%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
           RR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF 
Sbjct: 100 RRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQ 159

Query: 182 HRLTKEDAMKWFQQKYDGIILNSKE 256
           HRLTKEDAMKWFQQKYDGIILN+K+
Sbjct: 160 HRLTKEDAMKWFQQKYDGIILNTKK 184


>BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p
           protein.
          Length = 163

 Score =  171 bits (416), Expect = 1e-43
 Identities = 75/85 (88%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
           RR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF 
Sbjct: 79  RRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQ 138

Query: 182 HRLTKEDAMKWFQQKYDGIILNSKE 256
           HRLTKEDAMKWFQQKYDGIILN+K+
Sbjct: 139 HRLTKEDAMKWFQQKYDGIILNTKK 163


>AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p
           protein.
          Length = 184

 Score =  171 bits (416), Expect = 1e-43
 Identities = 75/85 (88%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
           RR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF 
Sbjct: 100 RRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQ 159

Query: 182 HRLTKEDAMKWFQQKYDGIILNSKE 256
           HRLTKEDAMKWFQQKYDGIILN+K+
Sbjct: 160 HRLTKEDAMKWFQQKYDGIILNTKK 184


>AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA
           protein.
          Length = 184

 Score =  171 bits (416), Expect = 1e-43
 Identities = 75/85 (88%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   RRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 181
           RR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF 
Sbjct: 100 RRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQ 159

Query: 182 HRLTKEDAMKWFQQKYDGIILNSKE 256
           HRLTKEDAMKWFQQKYDGIILN+K+
Sbjct: 160 HRLTKEDAMKWFQQKYDGIILNTKK 184


>BT024303-1|ABC86365.1|  142|Drosophila melanogaster IP12083p
           protein.
          Length = 142

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 219 WNHFIASSFVRRWGNPTFPV 160
           W  F+A SFV    +P FPV
Sbjct: 95  WEQFVAQSFVTNLKDPLFPV 114


>AE014297-3651|AAN14023.1|  542|Drosophila melanogaster CG31105-PA
           protein.
          Length = 542

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 219 WNHFIASSFVRRWGNPTFPV 160
           W  F+A SFV    +P FPV
Sbjct: 88  WEQFVAQSFVTNLKDPLFPV 107


>BT011097-1|AAR82763.1|  871|Drosophila melanogaster RE21038p
           protein.
          Length = 871

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 178 KSHFSCLTPSVCYVETWPAKYDVKVQSIN 92
           KS FSC    + +VE +  KY+++++  N
Sbjct: 340 KSTFSCKGRDISFVEYYLTKYNIRIRDHN 368


>AF104355-1|AAD08705.1|  844|Drosophila melanogaster PIWI protein.
          Length = 844

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 178 KSHFSCLTPSVCYVETWPAKYDVKVQSIN 92
           KS FSC    + +VE +  KY+++++  N
Sbjct: 312 KSTFSCKGRDISFVEYYLTKYNIRIRDHN 340


>AF104354-1|AAD08704.1|  843|Drosophila melanogaster PIWI protein.
          Length = 843

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 178 KSHFSCLTPSVCYVETWPAKYDVKVQSIN 92
           KS FSC    + +VE +  KY+++++  N
Sbjct: 312 KSTFSCKGRDISFVEYYLTKYNIRIRDHN 340


>AE014134-2002|AAF53043.1|  843|Drosophila melanogaster CG6122-PA
           protein.
          Length = 843

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 178 KSHFSCLTPSVCYVETWPAKYDVKVQSIN 92
           KS FSC    + +VE +  KY+++++  N
Sbjct: 312 KSTFSCKGRDISFVEYYLTKYNIRIRDHN 340


>BT024964-1|ABE01194.1|  405|Drosophila melanogaster IP15271p
           protein.
          Length = 405

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
           IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 50  IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 87


>AY128474-1|AAM75067.1| 1113|Drosophila melanogaster RE32455p
           protein.
          Length = 1113

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
           IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 677 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 714


>AY051434-1|AAK92858.1|  955|Drosophila melanogaster GH10726p
           protein.
          Length = 955

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
           IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 363 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 400


>AJ309488-1|CAC83725.1|  793|Drosophila melanogaster chitin synthase
           B protein.
          Length = 793

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
           IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 201 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 238


>AF227729-1|AAG09735.1|  997|Drosophila melanogaster chitin synthase
           1 protein.
          Length = 997

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
           IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 405 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 442


>AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,
            isoform B protein.
          Length = 1674

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229  IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
            IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 1023 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 1060


>AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,
            isoform C protein.
          Length = 1615

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229  IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
            IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 1023 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 1060


>AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,
            isoform A protein.
          Length = 1615

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 229  IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 116
            IFL+  + S F+   +    F C+T  + Y+ + P+ Y
Sbjct: 1023 IFLISMVGSFFIAACLHPQEFWCITCGLIYLLSIPSMY 1060


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,317,434
Number of Sequences: 53049
Number of extensions: 257078
Number of successful extensions: 459
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)