Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00413
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 159 4e-40
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 159 4e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 159 4e-40
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 88 1e-18
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 83 3e-17
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 62 1e-10
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.020
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.035
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.081
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.19
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.25
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.33
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.57
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 28 1.3
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 1.7
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 1.7
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 4.0
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 4.0
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 5.3
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 7.0
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 7.0
SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 26 7.0
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 25 9.3
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 25 9.3
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 159 bits (386), Expect = 4e-40
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
++D+I PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPG IV FAPA +TTEVK
Sbjct: 229 AIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVK 288
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L +PGDNVGFNVKNVS ++
Sbjct: 289 SVEMHHESLDAGLPGDNVGFNVKNVSVKD 317
Score = 145 bits (351), Expect = 7e-36
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+
Sbjct: 71 ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLA+TLGV
Sbjct: 131 GQTREHALLAYTLGV 145
Score = 118 bits (283), Expect = 1e-27
Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+QLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+
Sbjct: 146 KQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPT 203
Query: 433 TKMPWFKGWQVERKEGKADGKCLIEVSMPSCHLPA-PLTSPCVFPCKTYTK 582
T MPW++GWQ E K G GK L+E ++ S PA P P P + K
Sbjct: 204 TNMPWYQGWQKETKAGVVKGKTLLE-AIDSIEPPARPTDKPLRLPLQDVYK 253
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 159 bits (386), Expect = 4e-40
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
++D+I PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPG IV FAPA +TTEVK
Sbjct: 229 AIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVK 288
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L +PGDNVGFNVKNVS ++
Sbjct: 289 SVEMHHESLDAGLPGDNVGFNVKNVSVKD 317
Score = 145 bits (352), Expect = 5e-36
Identities = 67/75 (89%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+
Sbjct: 71 ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLA+TLGV
Sbjct: 131 GQTREHALLAYTLGV 145
Score = 118 bits (283), Expect = 1e-27
Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+QLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+
Sbjct: 146 KQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPT 203
Query: 433 TKMPWFKGWQVERKEGKADGKCLIEVSMPSCHLPA-PLTSPCVFPCKTYTK 582
T MPW++GWQ E K G GK L+E ++ S PA P P P + K
Sbjct: 204 TNMPWYQGWQKETKAGVVKGKTLLE-AIDSIEPPARPTDKPLRLPLQDVYK 253
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 159 bits (386), Expect = 4e-40
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
++D+I PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPG IV FAPA +TTEVK
Sbjct: 229 AIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVK 288
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L +PGDNVGFNVKNVS ++
Sbjct: 289 SVEMHHESLDAGLPGDNVGFNVKNVSVKD 317
Score = 145 bits (351), Expect = 7e-36
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+
Sbjct: 71 ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLA+TLGV
Sbjct: 131 GQTREHALLAYTLGV 145
Score = 118 bits (283), Expect = 1e-27
Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+QLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+
Sbjct: 146 KQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPT 203
Query: 433 TKMPWFKGWQVERKEGKADGKCLIEVSMPSCHLPA-PLTSPCVFPCKTYTK 582
T MPW++GWQ E K G GK L+E ++ S PA P P P + K
Sbjct: 204 TNMPWYQGWQKETKAGVVKGKTLLE-AIDSIEPPARPTDKPLRLPLQDVYK 253
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = +2
Query: 32 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 211
T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362
Query: 212 QTREHALLAFTLGVN 256
QTREHA+LA T G+N
Sbjct: 363 QTREHAVLARTQGIN 377
Score = 42.7 bits (96), Expect = 6e-05
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 510 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 689
LD++ R + P +P+ YK +GT+ G++E G +K + V+ P N T EV +
Sbjct: 455 LDSMTHLERKVNAPFIMPIASKYK--DLGTILEGKIEAGSIKKNSNVLVMPINQTLEVTA 512
Query: 690 V-EMHHEALQEAVPGDNVGFNVKNVSS 767
+ + E + ++ GD V V+ S
Sbjct: 513 IYDEADEEISSSICGDQVRLRVRGDDS 539
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 83.4 bits (197), Expect = 3e-17
Identities = 40/76 (52%), Positives = 49/76 (64%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +N
Sbjct: 241 VTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLEN 300
Query: 209 GQTREHALLAFTLGVN 256
GQTREHA L LG++
Sbjct: 301 GQTREHAYLLRALGIS 316
Score = 52.4 bits (120), Expect = 7e-08
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +1
Query: 256 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML--E 426
+++V VNK+D +SE RF+EIK VS + IK +G+ + V FVPIS G N++ +
Sbjct: 317 EIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKD 374
Query: 427 PSTKMPWFKG 456
S W+KG
Sbjct: 375 SSDLYKWYKG 384
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
+LD ++PP +P KPLRL + DVY+ TV GRVE G ++ ++ + VK
Sbjct: 390 ALDQLVPPEKPYRKPLRLSIDDVYRSPRSVTV-TGRVEAGNVQVNQVLYDVSSQEDAYVK 448
Query: 687 SVEMHHEALQE-AVPGDNVGFNVKNV 761
+V + + AV GD V + ++
Sbjct: 449 NVIRNSDPSSTWAVAGDTVTLQLADI 474
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 61.7 bits (143), Expect = 1e-10
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 102 ITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------ 155
Query: 209 GQTREHALLAFTLGV 253
QTREH LLA +GV
Sbjct: 156 -QTREHLLLARQVGV 169
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +3
Query: 528 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGT--IVVFAPANITTEVKSVEMH 701
P R TD P + ++DV+ I G GTV GRVE G LK G +V +++ T V +EM
Sbjct: 245 PERKTDVPFLMAIEDVFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSHLKTTVTGIEMF 304
Query: 702 HEALQEAVPGDNVGFNVKNV 761
+ L AV GDN G ++++
Sbjct: 305 KKQLDAAVAGDNCGLLLRSI 324
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.020
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 56 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 226
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.035
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 56 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 32.3 bits (70), Expect = 0.081
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
ITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 79 ITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.19
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 74 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 169
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 47 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 26.6 bits (56), Expect = 4.0
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 510 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 689
+ I PP + PLR L D + G + + R+ G +K G V+ EV+
Sbjct: 230 IQKIPPPKGSENAPLRCLLIDSWYNSYQGVIGLVRIMEGFIKKGGKVMSVNTGRKYEVQQ 289
Query: 690 VEMHHEALQEA--VPGDNVGF---NVKNV 761
V + + + E + VG+ N+KN+
Sbjct: 290 VGIMYPDMTEVSRLRAGQVGYIIWNMKNI 318
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 71 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.57
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIV 166
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 302 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDGRWSV 472
+ +PD+ ++PHT +R +T + L LSC + +E + P G +D + +
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNGYVI 204
Query: 473 RKAKLTENAS----LKSRCHPATCP 535
++ + S L+ ATCP
Sbjct: 205 SQSFSLRDPSARGGLRRYAIIATCP 229
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 71 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 71 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1073
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 156 CSS*LPVPVNSKLVSLRTVKPVSMPCSLSPSVSTAHRRSKQNGFH 290
C+S +PV S +VS+ T K SL SV+ S+ N +
Sbjct: 913 CNSDCELPVRSPIVSMSTYKDYVYTSSLRDSVAVFQYDSENNSLN 957
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 682 TSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSC 566
+SVV+ + +T V + + VST TGTV +P +C
Sbjct: 86 SSVVLYSAKETVTVSSYWSLVSTSVTGTVYVPYTSSVAC 124
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 86 IDAPGHRDFIKNMITGTSQADCAVLIV 166
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = +2
Query: 368 TQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKSR------CHPAT 529
T L L+ F T+T W++ PK L R R + A L N L R CHP +
Sbjct: 360 TPLGELNWIFTAITDTIAWNVFPKHLFRRLFRQDLMVAALFRNFLLAERIMLVHSCHPQS 419
Query: 530 CP 535
P
Sbjct: 420 SP 421
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 121
+ I+I + E +++ T+ID PG DFI N
Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 545 VSGAGRWQDGIETSMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCH 402
V GAG S+ P+ LPS + P L E +ML CH
Sbjct: 543 VEGAGGGHAPDIISLVQNPNILPSSTNPTRPFTTNTLDEELDMLMVCH 590
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 177 PVNSKLVSLRTVKPVSMPCSL---SPSVSTAHRRSKQ 278
P ++ SL T KPVSMP S PSV+ + S Q
Sbjct: 392 PPPPRVKSLATNKPVSMPVSTEQSDPSVAASSSSSSQ 428
>SPAPB1A10.07c |||sphingolipid biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 558 DAGACQ-WGGQVAGWHRDFNEAFSVSFAFLTL 466
D G C WG +G R+F++ +F F T+
Sbjct: 287 DEGQCNPWGNSASGT-REFSKVIGAAFTFFTI 317
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 631 NTPVSTLPTGTVPIPPIL 578
N P S LPT VP+P I+
Sbjct: 666 NPPTSALPTVPVPLPSII 683
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 280 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 450
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,426,086
Number of Sequences: 5004
Number of extensions: 77382
Number of successful extensions: 301
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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