Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00413
(784 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 151 7e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 151 7e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 151 7e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 151 7e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 88 5e-18
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 80 1e-15
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 3e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 61 7e-10
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.070
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.070
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.21
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.21
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.21
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.21
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.28
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.37
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.37
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.49
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.49
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 1.1
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 2.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 2.0
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 2.0
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.6
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.6
At2g39560.1 68415.m04853 expressed protein 29 4.6
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 6.1
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 6.1
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 6.1
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 8.0
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 8.0
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 8.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 151 bits (365), Expect = 7e-37
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
+LD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVK
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVK 278
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L EA+PGDNVGFNVKNV+ ++
Sbjct: 279 SVEMHHESLLEALPGDNVGFNVKNVAVKD 307
Score = 142 bits (345), Expect = 2e-34
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLAFTLGV
Sbjct: 131 GQTREHALLAFTLGV 145
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 433 TKMPWFKG 456
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 7e-37
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
+LD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVK
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVK 278
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L EA+PGDNVGFNVKNV+ ++
Sbjct: 279 SVEMHHESLLEALPGDNVGFNVKNVAVKD 307
Score = 142 bits (345), Expect = 2e-34
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLAFTLGV
Sbjct: 131 GQTREHALLAFTLGV 145
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 433 TKMPWFKG 456
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 7e-37
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
+LD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVK
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVK 278
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L EA+PGDNVGFNVKNV+ ++
Sbjct: 279 SVEMHHESLLEALPGDNVGFNVKNVAVKD 307
Score = 142 bits (345), Expect = 2e-34
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLAFTLGV
Sbjct: 131 GQTREHALLAFTLGV 145
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 433 TKMPWFKG 456
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 7e-37
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 686
+LD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVK
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVK 278
Query: 687 SVEMHHEALQEAVPGDNVGFNVKNVSSRN 773
SVEMHHE+L EA+PGDNVGFNVKNV+ ++
Sbjct: 279 SVEMHHESLLEALPGDNVGFNVKNVAVKD 307
Score = 142 bits (345), Expect = 2e-34
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 209 GQTREHALLAFTLGV 253
GQTREHALLAFTLGV
Sbjct: 131 GQTREHALLAFTLGV 145
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 432
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 433 TKMPWFKG 456
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +2
Query: 32 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 211
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 212 QTREHALLAFTLGVN 256
QTREH LA TLGV+
Sbjct: 226 QTREHVQLAKTLGVS 240
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +1
Query: 256 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPS 432
+LIV VNKMD +S+ R++EI++++ ++K GYN V F+PISG G NM +
Sbjct: 241 KLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRM 300
Query: 433 TK--MPWFKG 456
+ PW+ G
Sbjct: 301 GQEICPWWSG 310
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/88 (28%), Positives = 48/88 (54%)
Frame = +3
Query: 510 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 689
LD+I P R + P R+P+ D +K +GTV +G+VE+G ++ G +V P +V +
Sbjct: 317 LDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVA 374
Query: 690 VEMHHEALQEAVPGDNVGFNVKNVSSRN 773
+ + ++ A PG+N+ + + +
Sbjct: 375 IYCDEDKVKRAGPGENLRVRITGIEDED 402
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK- 205
IT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 303 ITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNL 362
Query: 206 NGQTREHALLAFTLGV 253
GQTREHA + GV
Sbjct: 363 KGQTREHARVLRGFGV 378
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 507 SLDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEV 683
++D++ P R KPL +P+ D + G V G++E G ++PG+ V+ P+ +
Sbjct: 453 AVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPSGDQGTI 512
Query: 684 KSVEMHHEALQEAVPGDNVGFNVKNVSS 767
+S+E +A A GDNV ++ + +
Sbjct: 513 RSLERDSQACTIARAGDNVALALQGIDA 540
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +1
Query: 253 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EP 429
+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++ P
Sbjct: 379 EQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAP 436
Query: 430 STK--MPWFKG 456
S W++G
Sbjct: 437 SDNRLSSWYQG 447
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 128 ITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------ 181
Query: 209 GQTREHALLAFTLGV 253
QT+EH LLA +GV
Sbjct: 182 -QTKEHILLAKQVGV 195
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +3
Query: 507 SLDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE- 680
++D +P P R T+ P L ++DV+ I G GTV GRVE G +K G V T
Sbjct: 272 AVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSY 331
Query: 681 -VKSVEMHHEALQEAVPGDNVGFNVKNV 761
V VEM + L EA+ GDNVG ++ +
Sbjct: 332 TVTGVEMFQKILDEALAGDNVGLLLRGI 359
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 61.3 bits (142), Expect = 7e-10
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 116 ITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP------ 169
Query: 209 GQTREHALLAFTLGVNS 259
QT+EH LLA +GV S
Sbjct: 170 -QTKEHILLARQVGVPS 185
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Frame = +3
Query: 474 GRQS*RKMPH*SLDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 650
GRQ+ K+ ++D +P P R DKP +P++DV+ I G GTV GR+E GV+K G V
Sbjct: 242 GRQAILKLMD-AVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEV 300
Query: 651 VF-----APANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 761
+ + V VEM + L GDNVG ++ +
Sbjct: 301 EILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGL 342
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.070
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.070
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 59 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 510 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 689
++ I PP ++ PLR+ L D + G + V G+L G V FA + + EV
Sbjct: 241 IERIPPPPGISESPLRMLLFDSFFNEYKGVICYVSVVDGMLSKGDKVSFAASGQSYEVLD 300
Query: 690 VEMHHEAL 713
V + H L
Sbjct: 301 VGIMHPEL 308
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITI A Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 119 ITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 178
Query: 209 GQTREH 226
Q R +
Sbjct: 179 RQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 29 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 208
ITI A Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 119 ITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 178
Query: 209 GQTREH 226
Q R +
Sbjct: 179 RQMRRY 184
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 77 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 62 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 172
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 62 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 172
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 74 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 172
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 56 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 172
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 56 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 65 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 77 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 727 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 626
G + WR W S DLT ++++ A ++ G T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 646 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 542
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -2
Query: 579 CIRLAGEDAGACQWGGQVAGWHRDFNEAFSVSFAFLT--LHLPSLEPR 442
C+ G+ A +W ++ H D F + + T LHLP + R
Sbjct: 853 CLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKR 900
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 357 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 458
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 304 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 393
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 420
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -1
Query: 169 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRS 14
++D+HS +L+ D + D + ++ N+VL F P+ D T +R+
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARA 103
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 86 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,483,236
Number of Sequences: 28952
Number of extensions: 430804
Number of successful extensions: 1506
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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