Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00412X
         (394 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0362 + 28739969-28740232,28740336-28740452,28740560-287406...    29   1.8  
05_03_0131 + 8779006-8779073,8779517-8779662,8779739-8780794,878...    27   5.4  
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446...    27   7.1  
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701...    26   9.4  
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673...    26   9.4  

>01_06_0362 +
           28739969-28740232,28740336-28740452,28740560-28740660,
           28741251-28741322,28741433-28741514,28741607-28741687,
           28742548-28742589,28743009-28743047,28743278-28743343,
           28743444-28743590,28743638-28743652
          Length = 341

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 60  SLVAASEQEYSPALNPVVLIDNGRCGVREVPL 155
           S V  +E+ Y+P+++PV+L D  R G + V L
Sbjct: 185 SFVDKTEKRYNPSMSPVILKDKWRKGSQWVAL 216


>05_03_0131 +
           8779006-8779073,8779517-8779662,8779739-8780794,
           8781070-8781232,8781423-8781494,8782076-8782147,
           8782643-8782815,8782958-8783163,8783277-8783403,
           8783793-8783864,8783984-8784176,8784298-8784768,
           8785635-8785740
          Length = 974

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 271 TRL*GAPSRRDPPSLRAWHPLREN 200
           T+L G P   DP SL+A HP   N
Sbjct: 771 TQLAGTPGYMDPESLQASHPSESN 794


>11_04_0301 +
           16142236-16142945,16143748-16144247,16144557-16144649,
           16144879-16145005,16145265-16145468,16145587-16145692
          Length = 579

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -2

Query: 144 PEHHI---SRYRLKQRDSVLGYIPVRSPLLRKSWLVSFPPLTNM 22
           PEHH     R     +  V+G+ P   P+L+++ ++    LTN+
Sbjct: 22  PEHHAVYSGRIVTLNKSGVVGHRPAPPPVLQEAQILDVDDLTNL 65


>06_03_1511 -
           30669292-30669401,30669894-30669930,30670012-30670107,
           30670186-30670281,30670679-30670828,30670956-30671100,
           30671178-30671251,30671325-30671445,30671697-30671821,
           30671898-30672047,30672249-30672324,30672496-30672557,
           30672597-30672839,30673354-30673683,30673776-30673932,
           30674008-30674139,30674219-30674277,30674734-30674798,
           30674878-30675094,30675413-30675499,30675655-30675750,
           30675938-30676003,30676096-30676287,30676380-30676532,
           30676812-30677052,30677322-30677515,30678212-30678348,
           30678474-30678480,30678708-30678830,30679370-30679427,
           30680018-30680090,30680493-30681765
          Length = 1714

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 309 WSLPPA*G-CTLKQPDSKELPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEP 145
           WS PPA   CTL  P +K  P+   L R  P         ++  L R R  +K +P
Sbjct: 57  WSPPPALDVCTLSFP-TKRQPIHRLLARLAPADPDTFLLDYRRFLHRHRGRKKPKP 111


>06_01_0878 +
           6735266-6735340,6735946-6736041,6738610-6738720,
           6738816-6739309,6739422-6739587,6739666-6739789,
           6739874-6739986,6740085-6740693,6743095-6743385,
           6743845-6743913,6744099-6744188,6744281-6744696,
           6744882-6744969
          Length = 913

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 210 YGKTAPFKTNLDRSRRDEKAEPPE 139
           YG + P K NL+ S  D  AE P+
Sbjct: 613 YGNSTPEKGNLEDSETDSLAESPQ 636


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,959,831
Number of Sequences: 37544
Number of extensions: 191573
Number of successful extensions: 451
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)