Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00412X
         (394 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical pr...    29   0.90 
U58761-7|AAB00717.1|  481|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z81112-3|CAB03273.1|  656|Caenorhabditis elegans Hypothetical pr...    27   4.8  
Z81113-6|CAD21647.2|  295|Caenorhabditis elegans Hypothetical pr...    27   6.3  

>Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical
           protein F31B9.3 protein.
          Length = 214

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = -2

Query: 270 PDSKELPLAATLRRYGPG-TLYGKTAPF--KTNLDRSRRDEKAEPPE--HHISRYRLKQR 106
           PD + +P+   +++Y PG + Y +      +T L R   DE+    E   H SR + K+R
Sbjct: 108 PDGQRMPVDEFVKQYAPGPSFYNRLCNMVAETELMREYNDEERRKYEENEHKSRMQKKER 167

Query: 105 DSVL 94
             +L
Sbjct: 168 KELL 171


>U58761-7|AAB00717.1|  481|Caenorhabditis elegans Hypothetical
           protein C01F1.1 protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 288 GCTLKQPDSKELPLAA-TLRRYGPGTLYGKTAPFKTNLDRSRRDEK 154
           G T+++ D++ + L+  T++ YG G+ YGK A  +    +  R  K
Sbjct: 50  GVTMEREDNQRVILSTQTVQEYGEGSEYGKAAREEARRKKYGRQSK 95


>Z81112-3|CAB03273.1|  656|Caenorhabditis elegans Hypothetical
           protein T02B5.3 protein.
          Length = 656

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = -3

Query: 203 KRPRSRRTWTGVVATRK 153
           ++PR ++TW+GV+ T+K
Sbjct: 64  RKPRPQKTWSGVLETKK 80


>Z81113-6|CAD21647.2|  295|Caenorhabditis elegans Hypothetical
           protein T03F6.6 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 146 LPNTTSPVID*NNGIQC--WAIFLFARRY*GNPG*FLFLRLLICL 18
           +PN     +D NN I C  ++IF F          F+F+ LLI L
Sbjct: 184 VPNDQGSALDANNNINCLPFSIFKFLNSKFNMKTCFIFMLLLIAL 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,834,068
Number of Sequences: 27780
Number of extensions: 143135
Number of successful extensions: 311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)