Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00411
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    28   0.074
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.39 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.69 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.69 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 0.074
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
 Frame = -3

Query: 779 TYNCYTVRPR*SRSAFSALDQLRLLGSVISDAFHPSAHGFTIRSAPTRVAFIFPHRLRRT 600
           TY+  T  P      FSA+D   L+    +DA +PS + + +      +  +    +R  
Sbjct: 124 TYSVKTGHPYFVNQLFSAVDPYGLVAQWATDALNPSVYTYEVSPVFVLMEEVVLREMRAI 183

Query: 599 FFL---WLDNVFSAGFVTTNAVSIGIAPTTVTLVDHDDPGAHSLP 474
                   D +F  G    N  +I  A     + D    G HSLP
Sbjct: 184 VGFEGGKGDGIFCPGGSIANGYAISCARYRF-MPDIKKKGLHSLP 227


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
 Frame = +3

Query: 600  CAPKTMWKNECNTC-W---CTSDGKPMCTRMECITNNTPEKSELIQGRECA--PGST 752
            CAP   W N  N C W    T DG      ++ +T   P +S        +  PGST
Sbjct: 1307 CAPGLHWDNNKNICDWPEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGST 1363


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 612 TMWKNECNTCWCTSDGKPMCTRMECITNNTPEKSELIQ 725
           T+W +  N+   T   K      + +T++ P KS L+Q
Sbjct: 144 TLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQ 181


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 612 TMWKNECNTCWCTSDGKPMCTRMECITNNTPEKSELIQ 725
           T+W +  N+   T   K      + +T++ P KS L+Q
Sbjct: 70  TLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQ 107


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 49  NEVFDCNLFYRFGATLRKWSPKM 117
           N   DC+    FGA L+K  PK+
Sbjct: 644 NSTVDCDDVGTFGAILKKLLPKV 666


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +2

Query: 161 KDKPSQITTDDASAVQEMQSEVECLAGTEW 250
           K+ PSQ   +  +A +++Q   +C+ G ++
Sbjct: 450 KNMPSQYIHEPWTAPEQVQRAAKCIIGKDY 479


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 349 CQPGTSFQRDCNTC 390
           C+PGT F    N C
Sbjct: 504 CRPGTVFHTQSNIC 517


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 85  QNDKTDCNQTPHFTQSSITTLFSTREVH 2
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 289 VAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNT 387
           VA+ L+ ++ +Q +  E  +  PG   Q+ C+T
Sbjct: 755 VAQYLQIENVEQTLNHEIKKVIPGRITQKSCST 787


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 85  QNDKTDCNQTPHFTQSSITTLFSTREVH 2
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 526 LQLLHWSTTTIPERILCPGSAQTSWELTIFYRHPRSIGPDRYLSRRKC 383
           L + H     +P   L   SAQT  EL + +    S+     L+R KC
Sbjct: 348 LDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKC 395


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 85  QNDKTDCNQTPHFTQSSITTLFSTREVH 2
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,625
Number of Sequences: 336
Number of extensions: 5048
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)