Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00411
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085) 35 0.086
SB_8898| Best HMM Match : WSC (HMM E-Value=6.4) 35 0.086
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 33 0.26
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.61
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14) 31 1.1
SB_58773| Best HMM Match : DUF834 (HMM E-Value=0.83) 30 1.8
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 30 1.8
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 30 2.4
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 30 2.4
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 30 2.4
SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06) 29 3.2
SB_32452| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_51894| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 28 7.5
SB_17940| Best HMM Match : Laminin_EGF (HMM E-Value=0.077) 28 7.5
SB_12890| Best HMM Match : A2M_recep (HMM E-Value=1.8e-25) 28 7.5
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.9
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 28 9.9
SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_11329| Best HMM Match : DUF1151 (HMM E-Value=0.0015) 28 9.9
>SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085)
Length = 350
Score = 34.7 bits (76), Expect = 0.086
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 570 CRLRHYKCRIHRHCT--YNCYTGRPRRSRSAF 481
C++++Y CR R C Y Y G+PRR R +
Sbjct: 128 CKVKYYHCRYRRRCVWRYKYYHGKPRRYRHCY 159
>SB_8898| Best HMM Match : WSC (HMM E-Value=6.4)
Length = 165
Score = 34.7 bits (76), Expect = 0.086
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 570 CRLRHYKCRIHRHCT--YNCYTGRPRRSRSAF 481
C++++Y CR R C Y Y G+PRR R +
Sbjct: 65 CKVKYYHCRYRRRCVWRYKYYHGKPRRYRHCY 96
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 271 RCSDSGVAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNTCVCLDNGLGLCSLDAC 435
R + G +C+++ C I + + PG +DC CVC D L C+ C
Sbjct: 224 RVNAVGKVQCIKRKECPCIHDAKIYK--PGDKVYKDCQLCVCKDGQLTNCTGQKC 276
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +1
Query: 253 DNCHFCRCSDSGVA---EC-LRQDSCDQIIFTEPVRCQPGTSFQRDC---NTCVCLDNGL 411
DN C++ G EC +RQD+C +T P+ C P ++F D +TC D+
Sbjct: 27 DNTESPVCTNDGKKFPNECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCKAQDDQP 86
Query: 412 GLCSLDACRRSSTP 453
++ C ++ P
Sbjct: 87 TCVCVEPCPKTLKP 100
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +1
Query: 253 DNCHFCRCSDSGVA---EC-LRQDSCDQIIFTEPVRCQPGTSFQRDC---NTCVCLDNGL 411
DN C++ G EC +RQD+C +T P+ C P ++F D +TC D+
Sbjct: 1001 DNTESPVCTNDGKKFPNECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCKAQDDQP 1060
Query: 412 GLCSLDACRRSSTP 453
++ C ++ P
Sbjct: 1061 TCVCVEPCPKTLKP 1074
>SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14)
Length = 338
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 259 CHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPG-TSFQRDCNTCVCLDNGLGLCSLDAC 435
CH CS SG+ C + SC I + C+PG T +C C + G S A
Sbjct: 215 CHIDECS-SGINNCHQDASCANTIGSFACTCKPGYTGDGINCADC-AMGMESGAISDSAI 272
Query: 436 RRSSTPKKFELIQGR 480
SS +K GR
Sbjct: 273 TASSYLEKLRPSNGR 287
>SB_58773| Best HMM Match : DUF834 (HMM E-Value=0.83)
Length = 248
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -3
Query: 740 SAFSALDQLRLLGSVIS---DAFHPSAHGFTIRSAPTRVAFIFP 618
S FS +L L GS IS +HP HG TI SA ++ FP
Sbjct: 37 SRFSKKYRLLLHGSTISRLSKKYHPLLHGSTISSARNTISSSFP 80
>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 618 WK-NECNTCWCTSDGKPMCTRMEC 686
WK ++C+TC+C +GK C C
Sbjct: 358 WKPDDCSTCFCKKNGKVECAHQMC 381
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 615 MWK-NECNTCWCTSDGKPMCTRMEC 686
MW+ ++C C C SD K CT+ C
Sbjct: 437 MWQQDDCTACICGSDRKLQCTKKTC 461
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 681 PS*CTWVYHPKCTNTCCIHFSTSSS 607
PS C W P CT+ CC S++
Sbjct: 961 PSSCAWTCAPDCTSECCARHKVSAA 985
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 86 ARHCESGALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEWETTAT 265
A+H G K P E P A Q + KP ++ D +SA +Q+ + + + ++
Sbjct: 393 AQHLHPGHNKTLPMQEDPAIATQPVQPKPQEV--DSSSAGSSVQTSNDSSPAPQEDDKSS 450
Query: 266 SAGALIQESPSA 301
SA + PS+
Sbjct: 451 SATEEYKSEPSS 462
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = +1
Query: 361 TSFQRDCNTCVCLDNGLG----LCSLDACRRSSTPKKFELIQGRECAP 492
T+ + DCNTC C+ +C D C SST G C P
Sbjct: 1195 TTVKEDCNTCSCVHGTRTCTKVVCGPDNCLNSSTVSNDICSMGSVCVP 1242
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 612 TMWKNECNTCWCTSDGKPMCTRMECITNNTPEKSELIQGRECAPGS 749
T K +CNTC C G CT++ C +N S + C+ GS
Sbjct: 1195 TTVKEDCNTCSCV-HGTRTCTKVVCGPDNC-LNSSTVSNDICSMGS 1238
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 528 CNADGYGICSDEACTEHIIEPKKECAPKTMWKNECNTCWCTSDGKPMCTRMECITNN 698
C D G SDE C E + +C P + + +CN C G P C + +C+ N
Sbjct: 639 CECDTKGALSDE-CQE--FGGQCQCRPYVIGR-QCNRCKTGYYGFPNCKKCQCVFCN 691
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = -1
Query: 733 SLPWISSDF--SGVLLVMHS-ILVHMGLPSEVHQHVLHSFFHIVF-GAHSFFGSIMCSVQ 566
SL W+ S +G V+ I V + +E VL +F H V AH F +M +
Sbjct: 398 SLSWVVSKLKVTGPSDVISDYISVRDSIKAEQELEVLDNFHHFVSTNAHLFVAKMMPDIV 457
Query: 565 ASSLQMPYPSALHLQLL 515
+LQ P S +H Q +
Sbjct: 458 QLALQQPSLSQVHTQAM 474
>SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06)
Length = 218
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Frame = +3
Query: 513 CNSCRCNADGYGICS---------DEACTEHIIEPKKEC------------APKTMW--- 620
C C CN+ CS D AC ++++EPK+ C A + W
Sbjct: 104 CQKCECNSGKASSCSIGYHCDALLDGACEKYVLEPKQCCPTCACVHNNTEMAEGSTWAFR 163
Query: 621 -KNECNTCWCTSDGKPMCTRMECITNNTPEKSELIQGRECAP 743
+C+ C C S G C+ + C +S+ I +C P
Sbjct: 164 KDAKCHECTC-SRGNGKCSFVGCSCPVGHHQSDSIPEGKCCP 204
>SB_32452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 680
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -1
Query: 628 SFFHIVFGAHSFFGSIMCSVQASSLQMPYPSALHLQLLHWSTT 500
SF H+ F HS S M V S L++ H LHW T
Sbjct: 235 SFMHLAFLHHSMLSSDMTMVLPSHLEV--TQGCHHTTLHWDDT 275
>SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/87 (26%), Positives = 30/87 (34%)
Frame = +1
Query: 163 RQTESDNNR*RVCRPRNAVGSGMPGGNRVGDNCHFCRCSDSGVAECLRQDSCDQIIFTEP 342
R S N R C + S N + C R + S + S EP
Sbjct: 213 RSNTSANTRANTCSNTSTYTSTNTRANTSSNTCADTRSNTSTSSYTGTNTSASYCRTPEP 272
Query: 343 VRCQPGTSFQRDCNTCVCLDNGLGLCS 423
RC P +F D C + NGL + S
Sbjct: 273 -RCPPLVNFSLDLPECFAIRNGLQVVS 298
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 358 GTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELI-QGRE 483
G DCN+CVC G +C+ C SS K L+ QG +
Sbjct: 256 GAEIPTDCNSCVCA-CGRWVCTALDCNPSSNHVKASLVLQGEQ 297
>SB_51894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 CSDEACTEHIIEPKKECAPKTM---WKNECNTCWCTSDGKPMCTRMEC 686
C +C EH E + + + K + W++E T W G P+ T C
Sbjct: 325 CHGPSCIEHKREARTDGSVKVVPYAWRSERETRWGCRGGNPLPTTCGC 372
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 235 GGNRVGDNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRC 351
G R G FCR S V Q + +Q +F+EP+ C
Sbjct: 113 GIKRNGGWAQFCRLSAKNVIPLPHQVTFEQALFSEPMSC 151
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 723 GSAQTSRECY**CIPS*CTWVYHPKCTNTCCIHFSTSSSAHI 598
GSA TS +C PS C P C CC+ TS +
Sbjct: 1897 GSAPTSSQC-----PSSCLLACQPSCPMECCLAAFTSKPVEV 1933
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +1
Query: 250 GDNCHFCRCSDSGVAECLRQDSCDQ----IIFTEPVRCQPGTSFQRDCNTCVCLDNGLG- 414
GD C DSG +C + +C + FT CQ G + DC C D G
Sbjct: 169 GDRCEKQCAGDSGGVDCRQHCNCTEWGTCNPFTGKCLCQSG-FYGEDCG-AECPDGTYGP 226
Query: 415 LCSLDA-CRRSSTPKKFELIQGR-ECAPG 495
C+ C++++T K I G +C PG
Sbjct: 227 ACTAHCKCQKNATCDK---IDGTCQCKPG 252
>SB_17940| Best HMM Match : Laminin_EGF (HMM E-Value=0.077)
Length = 816
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 107 ALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEWETT 259
+LK +PG E A K+KP + D ++++E QSEV +A T + T
Sbjct: 510 SLKETPG-EDRAIAIISLKEKPGKYRAIDITSLKETQSEVRNIAITSMKET 559
>SB_12890| Best HMM Match : A2M_recep (HMM E-Value=1.8e-25)
Length = 203
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 657 HPKCTNTCCIHFSTSSSAHILSL-AR*CVQCRLRHYKCRIHRHCT 526
HP CTNT C S++ I R +Q + R C HR C+
Sbjct: 43 HPICTNTSCGLLRECSTSRIARFPKRDFIQNQERKTSCFNHRFCS 87
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 229 MPGGNRVGDNCHFCRCSDSGVAECLRQDSCD 321
+PG G +C C + V EC R D CD
Sbjct: 773 LPGYTGDGVSCEHDECFVADVKECARLDRCD 803
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 495 IVVVDQCNSCR-CNADGYGICSDEACTEHIIEPKKECAPKTMWKNECN 635
++ VD C + + G C +AC+ H+ E ++C KT +++EC+
Sbjct: 981 LLKVDSCAEQKEISVKHKGAC--DACSNHVCEENEDCDKKT-YQSECH 1025
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Frame = +3
Query: 474 GQRMRSGIVVVDQCNSCRCNADGYGICSDEACTE-HIIEPKKECAPKTMWKNECNTCWCT 650
G+ +G++ +C CR CS ++ TE H E + K C C
Sbjct: 150 GKYYDTGLLFCKECTVCRVGHGATRPCSTKSDTECHPCE-AGTFSDKESLSEPCRPCRVC 208
Query: 651 SDGKPMCTRMECITNNTPEKSELIQGRECAPGSTWSNRVT 770
S G + T + N KS P ST S++ T
Sbjct: 209 STGYVIATPCSSVNNTKCTKSR----NTSKPSSTTSSKST 244
>SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +1
Query: 124 WHRRPMCSRARIKRQTESDNNR*RVCRPRNAVGSGMPGGNRVGDNCHFCRCSDSGVA 294
W RRPM R+R R + SD R V R R A + + N DSGV+
Sbjct: 1078 WVRRPMPQRSRFTR-SSSDGVRQLVMRSRQASVTSCDRRISICSNGSLNESEDSGVS 1133
>SB_11329| Best HMM Match : DUF1151 (HMM E-Value=0.0015)
Length = 746
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -1
Query: 670 HMGLPSEVHQHVLHSFFHIVFGAHSFFGSIMCSVQ-ASSLQMPYPSALHLQLL 515
H+G+P E Q V + + + F S+ C + ASS++ PYPSA++++ L
Sbjct: 457 HLGIPGEFIQ-VFGDWASDAYRGYLEF-SMPCKLALASSIRTPYPSAVNVRPL 507
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,936,234
Number of Sequences: 59808
Number of extensions: 712581
Number of successful extensions: 2249
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2246
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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