Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00409
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 41 0.001
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 40 0.002
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 38 0.007
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 37 0.016
04_01_0060 - 607615-607706,608497-608531,609283-609360,610402-61... 33 0.35
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 32 0.61
07_03_1482 - 26864793-26865043,26865325-26865454,26865564-268657... 31 1.4
06_01_0292 + 2136637-2137050,2137162-2137671 31 1.4
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 30 1.9
06_01_1059 + 8512335-8513444 30 2.5
08_02_0849 - 21841470-21841883,21843748-21843813,21844768-218449... 29 3.3
03_02_1005 - 13136999-13137467,13137871-13138050,13138422-131385... 29 3.3
09_04_0445 - 17677126-17677512,17677608-17678564 29 4.3
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 4.3
03_05_0847 + 28186873-28188147 29 5.7
11_01_0128 - 1043053-1043151,1043238-1043570,1043588-1043707,104... 28 7.5
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 28 7.5
07_03_0072 - 13051145-13052362 28 7.5
03_06_0603 + 34999083-34999703,35000092-35000177,35000400-350007... 28 7.5
12_02_0630 + 21367620-21367695,21367890-21367976,21368287-213683... 28 9.9
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 9.9
01_05_0644 - 23893047-23893279,23893416-23893479 28 9.9
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 41.1 bits (92), Expect = 0.001
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 514 LDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+D+ WH CF C C P+++ F++ E+QP C
Sbjct: 273 MDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSC 308
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 117 CNSCDKVI-QGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNN 248
C C I GR ++ ++ WHP+ F C C KPI +F H +
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHED 301
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 269 FTKHHSPRCHGCGDPITD-RVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDC 445
F S C GC +PI R + + WH F F +PY C
Sbjct: 249 FASSGSRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSC 308
Query: 446 YADKFATRCKGCGN 487
Y D F +C C N
Sbjct: 309 YKDFFHPKCDVCKN 322
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 114 VCNSCDKVI-QGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIACPASP 275
VC C I QGR ++ ++ WHP+ F C C +PI + + +G I A P
Sbjct: 177 VCAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRAHP 231
Score = 30.7 bits (66), Expect = 1.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 514 LDAKWHRDCFTCMKCRNPVTD 576
+D+ WH CF C C P+++
Sbjct: 194 MDSVWHPQCFRCFACDRPISE 214
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 117 CNSCDKVI-QGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNN 248
C C I GR ++ + WHPE F C+ C +PI +F N
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGN 602
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 514 LDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+ A WH +CF C C P+ D FS+ N P C
Sbjct: 574 MGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTC 609
Score = 35.5 bits (78), Expect = 0.050
Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +2
Query: 293 CHGCGDPITD-RVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATR 469
C GC I R + +G WH F F PY CY ++F +
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 470 CKGC 481
C C
Sbjct: 618 CDVC 621
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 114 VCNSCDKVI-QGRIVTALNKKWHPEHFVCNTCRKPI 218
VC C I G ++ L WHP+ F C++CR PI
Sbjct: 113 VCGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPI 148
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGK 618
WH CF C CR+P+ + + ++ C K
Sbjct: 134 WHPQCFRCSSCRHPIREMEVTFLQFSLECLK 164
>04_01_0060 -
607615-607706,608497-608531,609283-609360,610402-610550,
610639-610730,611202-611280,611774-612150,613016-613226
Length = 370
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 407 FMEQAGRPYCSDCYADKFATR--CKGCGNPIVDKAISRLTLSGTAIASRA 550
++ +AG C+ C + +A+R CK CG P + A+ L+++G A+ + A
Sbjct: 60 WLPRAGDWICTGCSNNNYASRKNCKKCGLPKEEAAMPALSMAGMAMPAYA 109
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 31.9 bits (69), Expect = 0.61
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLC 612
+HR CF C C++ ++ +S +E P C
Sbjct: 29 FHRSCFKCQHCKSTLSLGNYSSIEGVPYC 57
>07_03_1482 -
26864793-26865043,26865325-26865454,26865564-26865771,
26867529-26867599,26867875-26867884,26869562-26870310
Length = 472
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 499 IDDWISAPLAASGELVCIAIG---AIGTASLFHEPSTANLLLASTADEVVSVPR 347
I W S +A + C I A+G SL H P+ N++ + + VPR
Sbjct: 235 IKRWKSQRVADQSDFRCSKIAVTVAVGIRSLLHNPTRGNMITGNVLRATIEVPR 288
>06_01_0292 + 2136637-2137050,2137162-2137671
Length = 307
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 199 TPAVSQSMEPSSTSTTTVSLRALLHQTSQPAVPWMRRPHH*PCDPSSWSIVARS 360
+PA + +M+PSS++ T+++ + + P +P+H C P S + ++ S
Sbjct: 207 SPASASAMQPSSSAAATLTMCPSCRRVATAGAP--HQPNHQQCHPKSNTTISSS 258
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 106 PPPSVTAATK*FKAES*RR*TRNGIPSTLSATPAVSQSMEP----SSTSTTTVSLRALLH 273
PPP V A FK++S +R +PST + +P+ S S P SS+ T T
Sbjct: 208 PPPPVPPAA--FKSKSYSASSRVSLPSTSAPSPSSSTSTSPTYSCSSSDTVTTPRNRKPE 265
Query: 274 QTSQPAVP 297
+ P +P
Sbjct: 266 LSKLPPIP 273
>06_01_1059 + 8512335-8513444
Length = 369
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -2
Query: 599 FSITENVESVTGFLHFMHVKQSRCHLASSARWLYRRLDFRTPCSEWRTCLHSNRSNRDGQ 420
FS T N+ +LH + K + ++ + P SEW NR+ DGQ
Sbjct: 67 FSSTTNLVEAGDWLHAVEKKLELLQCTDQEKVVFASHQLQGPASEWWDHFRMNRA--DGQ 124
Query: 419 PV 414
P+
Sbjct: 125 PI 126
>08_02_0849 - 21841470-21841883,21843748-21843813,21844768-21844951,
21845427-21847468,21848544-21848870
Length = 1010
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 94 QRLKPPPSVTAATK*FKAES*RR*TRNGIPSTLSATPAVSQSMEPSSTST-TTVSLRA 264
+ + PPS AA AES RR R PS S T + + PS+ T TTV + A
Sbjct: 913 KEIHAPPSPVAAAAILAAESPRRTYRPSFPSQESHTRHRNTTNSPSAVVTATTVFIHA 970
>03_02_1005 -
13136999-13137467,13137871-13138050,13138422-13138551,
13138651-13138738,13139316-13139660
Length = 403
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 388 LLASTADEVVSVPRYS-KSLDHTVSDGVAASMAPRAVMFGEAGHAMTPLLCWWNLAPSIG 212
L+ DE S+ R+S +S H G APR G A A CW L P +
Sbjct: 6 LIQEMRDEFGSISRHSLRSRSHRGGGG-----APRVAAVGPAEAAAMQQSCWAQLPPEL- 59
Query: 211 LRQVL 197
LR+VL
Sbjct: 60 LREVL 64
>09_04_0445 - 17677126-17677512,17677608-17678564
Length = 447
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -1
Query: 612 AEWLVFHHGECRIG--HWIPAL 553
A W +FHHGE R+G W+ +L
Sbjct: 180 ARWALFHHGEVRLGMSPWLTSL 201
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 508 LALDAK-WHRDCFTCMKCRNPVTDSTFSVMENQPLC 612
LA D + +HR CF C C+ + S +S +E C
Sbjct: 26 LAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYC 61
>03_05_0847 + 28186873-28188147
Length = 424
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 202 PAVSQSMEPSSTSTTTVSLRALLHQTSQPAVPWMRRPHH*P 324
PA + PSSTSTTT++ + TS PHH P
Sbjct: 333 PAPALRRVPSSTSTTTLAAAVAVASTSTDGDDDDDEPHHPP 373
>11_01_0128 -
1043053-1043151,1043238-1043570,1043588-1043707,
1043810-1043993,1044088-1044275,1044714-1044808,
1044884-1045003,1045232-1045350,1052717-1052799,
1052892-1053071
Length = 506
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 181 PSTLSATPAVSQSMEPSSTSTTTVSLRALLHQTSQPAVPWMRRPHH*PCDPSSWSIVARS 360
P T +A+P ++S+ S ST R+++H +S P R H DPS+ + A S
Sbjct: 101 PRTATASPPTTKSLVTSPKSTDEHKDRSIIHASSSP-----ERSSH---DPSAAANPALS 152
Query: 361 PLRLRWMQEG 390
+ +EG
Sbjct: 153 ASAQEYTEEG 162
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -3
Query: 367 EVVSVPRYSKSLDHT--VSDGVAASMAPRAVMFGEAGHAMTPLLCWWNLAPSIGLRQVLQ 194
EV+ P+ + LD T V D S P A++ G + +C + P I
Sbjct: 404 EVIDPPKNEEMLDVTELVDDHTQHSPKPNAMVSGNVRELLECPVCLNAMYPPIHQCSNGH 463
Query: 193 TKCSGC 176
T CSGC
Sbjct: 464 TLCSGC 469
>07_03_0072 - 13051145-13052362
Length = 405
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 585 ECRIGHWIPALHAREAIAVPLSVKREMALSTIGFP 481
+CR G+W R + VPL +R +++ FP
Sbjct: 220 QCRRGYWRSQRRQRRRLRVPLPWRRSTVRASVRFP 254
>03_06_0603 +
34999083-34999703,35000092-35000177,35000400-35000796,
35000906-35001154,35001522-35001749,35002524-35002973,
35003848-35003961,35004171-35004216,35004408-35004574
Length = 785
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = -2
Query: 401 HRQSPSC---IHRRRSGERATILQELGSHGQ*WGRRIHGTAG 285
HR +P C + R SG T + G WG HG G
Sbjct: 34 HRGAPPCGAALWRHHSGRAVTTAAAAAATGDHWGAEYHGGGG 75
>12_02_0630 +
21367620-21367695,21367890-21367976,21368287-21368333,
21368413-21368470,21369056-21369166,21369353-21369478,
21370123-21370182,21370966-21371186,21371274-21371460,
21371939-21372063
Length = 365
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 195 CNTCRKPIDGAKFHQHNNGVIACPASPN 278
CNTC+KPI +++ H + +PN
Sbjct: 73 CNTCKKPIKASQYAVHAERCSSGKVNPN 100
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 169 RNGIPSTLSATPAVSQSMEPSSTSTTTVSLRALL 270
+ G PS L+ P V + PS + + +VSL A L
Sbjct: 1909 QKGAPSGLNTVPVVGSGLPPSRSMSDSVSLDAWL 1942
>01_05_0644 - 23893047-23893279,23893416-23893479
Length = 98
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 192 QSARDAISCSAPSRFCLESLCRSCYR 115
Q D I+ +PS FC+ SCYR
Sbjct: 45 QPEMDPITICSPSNFCIPEAWSSCYR 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,016,637
Number of Sequences: 37544
Number of extensions: 590814
Number of successful extensions: 1991
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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