Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00409
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 68 8e-12
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 56 4e-08
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 51 1e-06
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 50 2e-06
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 49 5e-06
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 49 5e-06
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 37 0.022
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 37 0.022
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 36 0.029
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 35 0.067
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 34 0.15
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 33 0.27
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 32 0.47
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 32 0.62
SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.82
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16) 30 1.9
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 30 1.9
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_34469| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_34468| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_2867| Best HMM Match : Aerolysin (HMM E-Value=5.3e-06) 30 2.5
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_18330| Best HMM Match : rve (HMM E-Value=1.2e-16) 30 2.5
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9) 29 3.3
SB_29640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_45743| Best HMM Match : Sushi (HMM E-Value=4.5e-10) 29 4.4
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_44332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16) 29 5.8
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24) 28 7.7
SB_12072| Best HMM Match : rve (HMM E-Value=2.8e-17) 28 7.7
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/75 (38%), Positives = 36/75 (48%)
Frame = +2
Query: 293 CHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRC 472
C C PI +V ALG +WH HF F E+ G+PYC Y D FA RC
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRC 341
Query: 473 KGCGNPIVDKAISRL 517
C PI+D ++ L
Sbjct: 342 AYCNGPILDSCVTAL 356
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +2
Query: 254 HCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPY 433
+C + +PRC C PI D + AL +WH HFV F E+ G+P+
Sbjct: 328 YCERDYHDTFAPRCAYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPF 387
Query: 434 CSDCYADKFATRC 472
C + Y FA RC
Sbjct: 388 CREDYYAMFAPRC 400
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 114 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHN 245
+C +C+K I G++ TAL K WHPEHF C C P+ F + +
Sbjct: 281 MCAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERD 324
Score = 48.4 bits (110), Expect = 7e-06
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 117 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHN 245
C C+ I VTAL++ WHPEHFVC C P FH+ +
Sbjct: 341 CAYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERD 383
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 511 ALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 612
ALD WH + F C +C NP D+ F + +P C
Sbjct: 355 ALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFC 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 511 ALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 612
AL WH + F C+ C P+ F + +P C
Sbjct: 296 ALGKTWHPEHFACVACEAPLGTQNFFERDGKPYC 329
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +3
Query: 114 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNN 248
+C SC K I GR +TA+++K+HPEHFVC C K ++ F + N+
Sbjct: 24 LCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQND 68
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +2
Query: 266 CFTKHHSPR---CHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYC 436
C +H+ R C+ C PIT R I A+ +H HFV F EQ +PYC
Sbjct: 13 CEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 72
Query: 437 SDCYADKF 460
C+ F
Sbjct: 73 HPCFVKLF 80
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 407 FMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAISRL 517
F + GRPYC Y K T C C PI + I+ +
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAM 40
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 511 ALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
A+ K+H + F C C + TF ++P C C
Sbjct: 39 AMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPC 75
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +2
Query: 293 CHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRC 472
C CG P+ DRV+ ALG +WH HFV + E+ G YC Y + + C
Sbjct: 81 CFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDIC 140
Query: 473 KGCGNPI 493
C I
Sbjct: 141 FECNKAI 147
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 117 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIACPASPN 278
C C + ++ R+V AL K WH EHFVC C KP G ++++ G+ C N
Sbjct: 81 CFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYE-RKGLAYCETHYN 133
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 132 KVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIACPASPNITARG 293
K + GR++ A+ WHP+ F C C + F + N G P +I G
Sbjct: 19 KFVIGRVIKAMQANWHPDCFRCEICNDCLADTGFVK-NAGSTYIPEGEHIMYMG 71
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 511 ALDAKWHRDCFTCMKCRNPVTDSTF 585
A+ A WH DCF C C + + D+ F
Sbjct: 28 AMQANWHPDCFRCEICNDCLADTGF 52
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/87 (27%), Positives = 35/87 (40%)
Frame = +2
Query: 236 PAQQRCHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFME 415
P C C+ S RC CG+P+ + + G +WH F F
Sbjct: 444 PKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSV 503
Query: 416 QAGRPYCSDCYADKFATRCKGCGNPIV 496
+ G YC +CY +A +C+ C IV
Sbjct: 504 RDGCRYCMECYGKFYAKQCEICLKAIV 530
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 CVPCFTKHHSPRCHGCGDPITDRV--IQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRP 430
C C+ ++ C CG I ++ G WH + F F+ +
Sbjct: 390 CNNCYVANYQKECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTF 449
Query: 431 YCSDCYADKFATRCKGCGNPIVDKAI 508
+C CY KF+ RC CG P+++ +
Sbjct: 450 FCPGCYQSKFSKRCASCGEPLLEGGV 475
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 335 ALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPI 493
A+ +WH HF F+ + +P C+DC+ D +A C+ C I
Sbjct: 294 AMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKI 346
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 135 VIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKF 233
+ G A+NK WH HF C TC I G +F
Sbjct: 286 IFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQF 318
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 517 DAKWHRDCFTCMKCRNPV-TDSTFSVMENQPLCGKC 621
D WH CF C CR P+ +D F+ +Q LC C
Sbjct: 358 DRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNC 393
Score = 34.3 bits (75), Expect = 0.12
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 508 LALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+A++ WH F C C + +T F V ++P+C C
Sbjct: 293 VAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDC 330
Score = 34.3 bits (75), Expect = 0.12
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
WH+ CF+C C + + FSV + C +C
Sbjct: 482 WHKACFSCYFCHRSLASAAFSVRDGCRYCMEC 513
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 517 DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKCA 624
++ +H++CF C +C + F ++ LCG CA
Sbjct: 539 ESNFHKECFMCSRCGRSLASEGFVREGDELLCGDCA 574
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 117 CNSCDKVI--QGRIVTALNKK-WHPEHFVCNTCRKPI 218
C +C + I + R +++ + + WH + F+C+ CR+P+
Sbjct: 339 CEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPL 375
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
WH +CF C C + S F ++ C C
Sbjct: 423 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGC 454
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/87 (27%), Positives = 35/87 (40%)
Frame = +2
Query: 236 PAQQRCHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFME 415
P C C+ S RC CG+P+ + + G +WH F F
Sbjct: 32 PKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSV 91
Query: 416 QAGRPYCSDCYADKFATRCKGCGNPIV 496
+ G YC +CY +A +C+ C IV
Sbjct: 92 RDGCRYCMECYGKFYAKQCEICLKAIV 118
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 341 GVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAI 508
G WH + F F+ + +C CY KF+ RC CG P+++ +
Sbjct: 8 GNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGV 63
Score = 34.3 bits (75), Expect = 0.12
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
WH+ CF+C C + + FSV + C +C
Sbjct: 70 WHKACFSCYFCHRSLASAAFSVRDGCRYCMEC 101
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 517 DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKCA 624
++ +H++CF C +C + F ++ LCG CA
Sbjct: 127 ESNFHKECFMCSRCGRSLASEGFVREGDELLCGDCA 162
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
WH +CF C C + S F ++ C C
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGC 42
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +2
Query: 245 QRCHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAG 424
+R C CF + C C I +Q G ++H+ F F +Q G
Sbjct: 221 ERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEG 280
Query: 425 RPYCSDCYADKFATRCKGCGNPI 493
R C +CY +++A RC C N I
Sbjct: 281 RNVCQNCYRERYAKRCGACHNLI 303
Score = 41.5 bits (93), Expect = 8e-04
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 508 LALDAKW-HRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+A D K+ HR+CFTC KC P+ F + + + +C C
Sbjct: 310 VAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 117 CNSCDKVIQG--RIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIACP 266
C +C +I+G + V K +H E F C C KP+ G KF + I P
Sbjct: 296 CGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLP 347
Score = 36.3 bits (80), Expect = 0.029
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 114 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKF 233
VC C++VI+ V +H E F C+ C KP+ G+ F
Sbjct: 236 VCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPF 275
Score = 36.3 bits (80), Expect = 0.029
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+H +CFTC C P+ S F+ E + +C C
Sbjct: 256 YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNC 287
Score = 31.5 bits (68), Expect = 0.82
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+H CF C +C+ P+ F + + LC C
Sbjct: 197 FHDKCFICDECKQPIGSKQFIRRDERRLCNNC 228
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 275 KHHS----PRCHGCGDPI-TDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCS 439
+HH+ PRC C + I ++ +A WH HF ++ + +PYC
Sbjct: 133 RHHAETLKPRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYCC 192
Query: 440 DCYADKFATRCKGCGNPI 493
C+ +A C CG PI
Sbjct: 193 HCFESLYAEFCDSCGEPI 210
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 117 CNSCDKVIQGRIVT-ALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIAC 263
C +CD++I T A + WH +HF C C P+ G ++ +N C
Sbjct: 143 CAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYCC 192
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 254 HCVPCFTKHHSPRCHGCGDPITDRVIQAL--GVSWHAHH--FVXXXXXXXXXXXXFMEQA 421
+C CF ++ C CG+PI Q G WHA + F F+ ++
Sbjct: 190 YCCHCFESLYAEFCDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKS 249
Query: 422 GRPYCS-DC 445
G YCS DC
Sbjct: 250 GEIYCSPDC 258
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 511 ALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
A D+ WH F C +C P+ + + +N+P C C
Sbjct: 158 AEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYCCHC 194
Score = 31.5 bits (68), Expect = 0.82
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGK 618
WH CF C C+ + D + +++ CG+
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGR 133
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 HCVPCFTKHHSPRCHGCGDPI-TDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRP 430
+C + + PRC C + I ++ QA +WH HF ++ + G+P
Sbjct: 361 YCGRHYAEQFKPRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQP 420
Query: 431 YCSDCYADKFATRCKGCGNPIVDKA 505
+C +CY +A C C I A
Sbjct: 421 HCLECYDKYYAKHCMSCKKNIAADA 445
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 117 CNSCDKVIQGRIVT-ALNKKWHPEHFVCNTCRKPIDG 224
C +CD++I T A ++ WH HF C C + + G
Sbjct: 374 CAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGG 410
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 517 DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGK 618
D WH CF C C N + D + + CG+
Sbjct: 331 DKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGR 364
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/55 (25%), Positives = 21/55 (38%)
Frame = +2
Query: 350 WHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAISR 514
WH FV + + G YC YA++F RC C I + ++
Sbjct: 334 WHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQ 388
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 511 ALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
A D WH+ F C++C + + QP C +C
Sbjct: 389 AEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLEC 425
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 114 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNN 248
+CNSC K I +V NK H E FVC CR P+ G F ++
Sbjct: 1 ICNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDD 45
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +2
Query: 257 CVPCFTKHHSPRCHGCGDPI--TDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRP 430
C C H++ RC C I T + + ++H+ FV F E G
Sbjct: 49 CKDCNRIHYAKRCVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSW 108
Query: 431 YCSDCYADKFATRCKGC 481
C DCY D++A RC C
Sbjct: 109 VCDDCYHDRYAKRCNMC 125
Score = 39.5 bits (88), Expect = 0.003
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 517 DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
+ +H DCF C +CR P+ TF+ E +C C
Sbjct: 79 EGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDC 113
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 117 CNSCDKVIQGRI--VTALNKKWHPEHFVCNTCRKPIDGAKFHQH 242
C +C + I+G + VT +H + FVC+ CRKP+ G F +H
Sbjct: 61 CVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEH 104
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 117 CNSCDKVIQGRI--VTALNKKWHPEHFVCNT--CRKPIDGAKFHQHNNGVIAC 263
CN C + ++ + V K +H E FVC CRKP+ GAKF ++G C
Sbjct: 122 CNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRRMC 174
Score = 37.5 bits (83), Expect = 0.013
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 529 HRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 621
H +CF C CR P+ TF + +++ +C C
Sbjct: 22 HSECFVCFHCRTPLAGKTFQMRDDRKVCKDC 52
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +2
Query: 293 CHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRC 472
C+ C IT V++ H+ FV F + R C DC +A RC
Sbjct: 2 CNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRC 61
Query: 473 KGC 481
C
Sbjct: 62 VAC 64
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +2
Query: 272 TKHHSP---RCHGCGDPIT-DRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCS 439
TK SP C GCG+ I + + AL WH F +M G+PYC
Sbjct: 79 TKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCF-SCTKCHCLLSLEYMGMDGKPYCE 137
Query: 440 DCYADKFATRCKGCGNPIVDKAI 508
Y + F C C I K +
Sbjct: 138 KDYQELFGVTCAACNGYITGKVL 160
Score = 39.1 bits (87), Expect = 0.004
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 117 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKP 215
C+SC ++G I++ K +H F CN+CR+P
Sbjct: 19 CDSCQLYLEGEIISIHGKNFHEACFACNSCRQP 51
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 508 LALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGK 618
LAL+ +WH CF+C KC + + + M+ +P C K
Sbjct: 103 LALEKQWHLWCFSCTKC-HCLLSLEYMGMDGKPYCEK 138
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 90 STKVEAPAV--CNSCDKVIQG-RIVTALNKKWHPEHFVCNTC 206
+TKV +P + C C + I+G + + AL K+WH F C C
Sbjct: 78 TTKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKC 119
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 CHGCGDPITDR-VIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATR 469
C GC +PI DR +++ + +WH F + + YC Y F T+
Sbjct: 46 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFSKDR-KLYCRTDYEKVFGTK 104
Query: 470 CKGCGNPI 493
C GC I
Sbjct: 105 CSGCKKTI 112
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 514 LDAKWHRDCFTCMKCRNPVTDSTFS 588
+D WH C C CR+ ++ S FS
Sbjct: 62 VDEAWHESCLQCCICRSQLSRSCFS 86
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 245 QRCHCVPCFTKHHSPRCHGCGD--PITDRVIQALGVSWHAHHFV 370
++ +C + K +C GC P + V++ALG +H H FV
Sbjct: 89 RKLYCRTDYEKVFGTKCSGCKKTIPANELVMRALGNVYHLHCFV 132
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 290 RCHGCGDPITDR-VIQALGVSWHAHHF-VXXXXXXXXXXXXFMEQAGRPYCSDCYADKFA 463
RC GC I DR +++ G +WH + G+ YC YA +F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFG 160
Query: 464 TRCKGCGNPI 493
T+C CG I
Sbjct: 161 TKCARCGRSI 170
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 108 PAVCNSCDKVIQG--RIVTALNKKWHPEHFVCNTCRKP-IDGAKFHQHNNGVI 257
P VC+ C+K I ++ A N +H E F C CRK + G F H+N V+
Sbjct: 78 PGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVL 130
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 526 WHRDCFTCMKCRNP-VTDSTFSVMENQPLC-GKCA 624
+H +CF C +CR V F +N+ LC +CA
Sbjct: 102 YHIECFGCQRCRKRLVVGEAFCFHDNKVLCLDRCA 136
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 RCHGCGDPITDR-VIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 466
+C GC PI D+ +++ L WHA F + G+ +C + ++ T
Sbjct: 4 QCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSRE-GKLFCKTDFYRRYGT 62
Query: 467 RCKGCGNPI 493
+C GC I
Sbjct: 63 KCSGCDQGI 71
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 514 LDAKWHRDCFTCMKCRNPVTDSTFS 588
LD WH C C C+ P+T+ FS
Sbjct: 21 LDGVWHAQCVQCSDCKCPLTERCFS 45
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 508 LALDAKWHRDCFTCMKCRNPVTDST 582
LA+ KWH+ C TC KC N DST
Sbjct: 24 LAIGKKWHKSCLTC-KCCNKSLDST 47
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 117 CNSCDKVI-QGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIAC 263
C C K + + A+ KKWH C C K +D +G I C
Sbjct: 10 CPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNL-ADKDGEIYC 58
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 287 PRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 466
PRC +R+ A+G WH ++ G YC CY F
Sbjct: 11 PRCSKTVYKAEERL--AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGP 68
Query: 467 RCKGCG 484
+ G G
Sbjct: 69 KGYGYG 74
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 111 AVCNSC-DKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVIAC 263
AVC C ++++ + A++++WH + C+ C +D +GVI C
Sbjct: 246 AVCAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILC 297
Score = 28.7 bits (61), Expect = 5.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 508 LALDAKWHRDCFTCMKC 558
+A+D +WH DC C C
Sbjct: 262 MAVDQEWHADCLKCSDC 278
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 CNSC-DKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHN 245
C C D V V+ N K+H + F C CRK +D H+
Sbjct: 44 CPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHD 87
Score = 31.1 bits (67), Expect = 1.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 526 WHRDCFTCMKCRNPVTDSTFSV 591
WH+ CF C KC + +T +V
Sbjct: 238 WHKSCFNCYKCHKKLDSTTVAV 259
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 87 MSTKVEAPAVCNSCDKVIQGRIVTAL-NKKWHPEHFVCNTCRKPID 221
MS+K C CDK + AL +H F C TC K +D
Sbjct: 2 MSSKYGGGPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLD 47
>SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 1443
Score = 31.5 bits (68), Expect = 0.82
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +1
Query: 67 KQSPAQSCQQRLKPPPSVTAATK*FKAES*RR*TRNGIPSTLSATPAVSQSMEPSSTSTT 246
+Q+PA++ PPP T A + + RR +N TL +T ++ S S T
Sbjct: 97 QQNPAETSAPNTNPPPVATPAPQ-RRRRRRRRRRKNHSVVTLDSTSVINISSTSLSPDET 155
Query: 247 TVSLRALLHQTSQPAVPW 300
+V R L + + W
Sbjct: 156 SVLARGLTFCPTPRTIDW 173
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 117 CNSCDKVIQGR--IVTALNKKWHPEHFVCNTCRKP-IDGAKFHQHNNGVIACPASPNI 281
C C K+I ++ L K +H F C TC + G +FH N + PN+
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCENDDPNL 765
>SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16)
Length = 979
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 90 STKVEAPAVCNSCDKVIQGRIVTALNKKWHPE----HFVCNTCRKPIDGAKFHQHNNGVI 257
+ K E P+ C +CD I V L+++ H C CR P+ A++ H +
Sbjct: 897 TVKKEKPS-CPTCDSTILAESVRPLHRRLHTILADLPLRCTCCRDPVAHAQYQSHVDLCT 955
Query: 258 ACPAS 272
PA+
Sbjct: 956 GIPAT 960
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 532 RDCFTCMKCRNPVTDSTFSVMENQPLCGK 618
RDCFT C P TD+ ++N P C +
Sbjct: 2269 RDCFTGSNCPGPRTDTKKCKVQNCPTCSQ 2297
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 532 RDCFTCMKCRNPVTDSTFSVMENQPLCGK 618
RDCFT C P TD+ ++N P C +
Sbjct: 247 RDCFTGSNCPGPRTDTKKCKVQNCPTCSQ 275
>SB_34469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 29.9 bits (64), Expect = 2.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 240 AGGTWLHRLAYGRCCR 193
+G WLH + YG+CC+
Sbjct: 142 SGDKWLHNIEYGKCCK 157
>SB_34468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 29.9 bits (64), Expect = 2.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 240 AGGTWLHRLAYGRCCR 193
+G WLH + YG+CC+
Sbjct: 114 SGDKWLHNIEYGKCCK 129
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 520 AKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 612
A WH+ CF C C + T+ + P C
Sbjct: 211 AVWHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_2867| Best HMM Match : Aerolysin (HMM E-Value=5.3e-06)
Length = 472
Score = 29.9 bits (64), Expect = 2.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 240 AGGTWLHRLAYGRCCR 193
+G WLH + YG+CC+
Sbjct: 20 SGDKWLHNIEYGKCCK 35
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 102 EAPAVCNSCDKV--IQGRIVTALNKKWHPEHFVCNTCRK 212
E P C CDK I+G + + + + +VC TC K
Sbjct: 430 EQPFKCTYCDKAFSIKGNLTVHIRRHTNERPYVCTTCGK 468
>SB_18330| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 997
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 660 DGGFYLYICDELSAFTAEWLVFHHGECRIGHWIP 559
D G Y C+E +AFT W VF H R GH P
Sbjct: 750 DNGPQFY-CEEFAAFTKSW-VFEHRTGRQGHQQP 781
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -3
Query: 484 SAPLAASGELVCIAIGAIGTASLFHEPSTANLLLASTADEVVSVPRYSKSLDHTVSDGVA 305
+AP A + LV A A + L P T LA+TA E + P + + + T +
Sbjct: 657 TAPEATTASLVTTAPEATTASLLTTAPETTTASLATTAPEATTAPEATTAPEATTAS--L 714
Query: 304 ASMAPRA 284
A+ AP A
Sbjct: 715 ATTAPEA 721
>SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9)
Length = 229
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/100 (22%), Positives = 30/100 (30%)
Frame = +2
Query: 248 RCHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGR 427
R H + H P C C P+T + A H +
Sbjct: 93 RPHMQDVYFPCHRPTCKTCTSPVTALTCKTCTSPDTALHARRVLSLSPPSHARRVLSLSP 152
Query: 428 PYCSDCYADKFATRCKGCGNPIVDKAISRLTLSGTAIASR 547
PY D Y CK C +P+ T TA+ +R
Sbjct: 153 PYMQDVYFTCHRPTCKTCTSPVTALTCKTCTSPVTALHAR 192
>SB_29640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 614 PQSGWFSITENVESVTGFLHFMHVKQSRCHLASSARWLYRRLDFRTPCSEWRTCLHSNRS 435
PQ F SV ++ +H + CH + + + PC C+HSNRS
Sbjct: 81 PQGAVFDTISVGPSVAFWMRALHRENGYCHHTLDTLVNHTTVTNQFPC-----CVHSNRS 135
Query: 434 NRDGQ 420
RD +
Sbjct: 136 CRDSE 140
>SB_45743| Best HMM Match : Sushi (HMM E-Value=4.5e-10)
Length = 206
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 278 HHSPRCHGCGDPITDRVIQA 337
H PRC C +P+TD IQ+
Sbjct: 50 HDPPRCEDCVNPLTDTAIQS 69
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 184 STLSATPAVSQSMEPSS-TSTTTVSLRALLHQTSQPAVPWMRR 309
S L +P S + PSS TSTT SL + HQ PA+ ++ R
Sbjct: 288 SYLHRSPVPSSHLLPSSPTSTTQASLTFIAHQ-YHPAISYLHR 329
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 7 GQNVRGFQNNTTQHESKKI*KQSPAQSCQQRLKPPPSV--TAATK*FKAES*RR*TRNGI 180
GQ R ++ T +E KQSP S LK PSV T + + S T+
Sbjct: 1519 GQPSRQSASSETTNEKLLPGKQSPGASSDTELKGTPSVTNTPQLQGTSSASESTQTQQSS 1578
Query: 181 PSTLSATPAVSQSMEPSSTSTTTVSLR 261
+T S TP + ++ ST+T+ + R
Sbjct: 1579 QTTQSTTPTAT-ALAVDSTTTSVMESR 1604
>SB_44332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 238 STTTVSLRALLHQTSQPAVPWMRRPHH*PCDPSSWSIVARSPLRLR 375
+TTT LR LL Q P + RP DP+ WS S LR++
Sbjct: 51 TTTTCFLRGLLMQDWSPNIIAQYRP----VDPNLWSFTTGSFLRIK 92
>SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16)
Length = 391
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 425 RPYCSDCYADKFATRCKGCGNPIVD---KAISRLTLSG 529
R +CS C DK + CG+PIVD K LT+ G
Sbjct: 12 RTHCSQC--DKIQKSIRKCGDPIVDVILKVAGILTVKG 47
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 172 NGIPSTLSATP-AVSQSMEPSSTSTTTVSLRALLHQTSQPA 291
N P+T+S A S + PSS+STT +L A + T+ P+
Sbjct: 1181 NSTPATVSIDSIAPSPTTPPSSSSTTITTLNASVMATATPS 1221
>SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24)
Length = 652
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 187 TLSATPAVSQSMEPSSTSTTTVSLRALLHQTSQPAV 294
T + P Q +P++TSTT ++ T+QP+V
Sbjct: 513 TCTGQPITGQPTQPATTSTTPTTMPTRKPSTAQPSV 548
>SB_12072| Best HMM Match : rve (HMM E-Value=2.8e-17)
Length = 1693
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 172 NGIPSTLSATPAVSQSMEPSSTSTTTVSLRALLHQTSQPAVPWMRRPHH 318
NGI +S++PA + P S+ + S ++ ++ + PHH
Sbjct: 519 NGIRGVVSSSPAPRSADAPGKKSSMSTSTSPMMRKSCYAILDMSNSPHH 567
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,887,145
Number of Sequences: 59808
Number of extensions: 626577
Number of successful extensions: 2257
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2241
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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