Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00407
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   113   2e-27
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   111   6e-27
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    24   1.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   6.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   6.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  113 bits (272), Expect = 2e-27
 Identities = 48/85 (56%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   PKGTTQGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDR-P 177
           PKGT  GYP  LFVM+SN+ DDRVEQD  G+C+D  ++CGI+D+ YPDRR+MG+PFDR P
Sbjct: 588 PKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGYPFDRMP 647

Query: 178 APAATTLSDFLRPNMAVRDCIVRFT 252
                TL  FL PNM V++ +++F+
Sbjct: 648 RDGVDTLQQFLTPNMRVQEVVIQFS 672


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  111 bits (267), Expect = 6e-27
 Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   PKGTTQGYPMVLFVMVSNWNDDRVEQDLVGSCNDAASYCGIRDRKYPDRRAMGFPFDR-P 177
           PKGT +G    LFVM+SN++DD+++Q   G CNDA SYCGI+D+ YPDRR+MG+PFDR P
Sbjct: 589 PKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGYPFDRMP 648

Query: 178 APAATTLSDFLRPNMAVRDCIVRFTE 255
                TL  FL PNM V+D  ++F++
Sbjct: 649 RNGVDTLQQFLTPNMRVQDVTIKFSD 674


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 602 NLAIFGNFIHSENTETT*RILRFR 531
           NL I  +F+H E+     R+ RFR
Sbjct: 27  NLGINSSFVHKEHCYVLVRLARFR 50


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = -1

Query: 733 IRVLLTITVIPLSLSQNCFY*TRPRIRRSCARLDKFRRITELFTILLFSAILFTVKIQKL 554
           I  ++T+T   + L  N  +    RIR    +L + +  T L       +IL  V +  +
Sbjct: 80  IITIVTLTSTSILLIVNAVFVKEKRIRTLLIKLSEIKENTRLAEKQARISILELVAVHLV 139

Query: 553 LKGFYDF 533
           L   Y F
Sbjct: 140 LAFLYSF 146


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 522 LTVAKS*NPLSSFCIFTVNKIAE 590
           L+V  S NPL S+ I  +NK+ +
Sbjct: 173 LSVTVSANPLPSYDIPEINKVVD 195


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 605 YNLAIFGNFIHSENT 561
           YNL  FG+FI + N+
Sbjct: 257 YNLTTFGSFIFNANS 271


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 151 RAGPGT--CGRGCRSTTPHHCTTPPGLAP 71
           ++ PGT        ST P  C +PP +AP
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAP 50


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 352 CTCRSSQIRDEVFCVAWW 299
           C  +S  + DE +C  +W
Sbjct: 29  CKLKSKVVGDETYCDRYW 46


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 170 SNGKPMARRSGYLRSRMPQYDAASLHDPTRSCSTRSS 60
           ++G+   + + Y  +   QY +  +  PT +CS  SS
Sbjct: 165 NSGEGSLQENRYYNNSPDQYQSYQILLPTPTCSEASS 201


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -1

Query: 643 ARLDKFRRITELFTILLFSAILFTVKIQKLLKGFYDFATVKRTPPLFILFYFMIERLL 470
           ARL +F    EL  ++LFS       + KLL     F    +T      F F++ R L
Sbjct: 347 ARLTQFLD-KELSYLILFSIGFNCFWVMKLLYNVLRFGAESQTINFMFSFGFILLRFL 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,555
Number of Sequences: 336
Number of extensions: 3764
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)