Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00407
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical p...    28   6.6  
AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical...    28   8.8  

>Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
 Frame = -2

Query: 642 HAWISFVELPSSLQSCYFRQF-------YSQ*KYRNYLKDFTISLRSNEHLHYL 502
           H++I+ +E  ++    +F +F       +S+  Y+  L +  ++LR+NEH+H L
Sbjct: 113 HSYIALIEKHAATARIFFNRFKIFIPECFSEFVYQLSLIEDAMTLRANEHVHIL 166


>Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
 Frame = -2

Query: 642 HAWISFVELPSSLQSCYFRQF-------YSQ*KYRNYLKDFTISLRSNEHLHYL 502
           H++I+ +E  ++    +F +F       +S+  Y+  L +  ++LR+NEH+H L
Sbjct: 113 HSYIALIEKHAATARIFFNRFKIFIPECFSEFVYQLSLIEDAMTLRANEHVHIL 166


>AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical
           protein C08F1.8 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -1

Query: 628 FRRITELFTILLFSAILFTVKIQKLLKGFYDFATVKRTPPLFIL 497
           F  +TEL+ ILL S     V+ +K++ GFY + T    P L I+
Sbjct: 172 FFALTELYCILLCSVDTSLVRDEKVIIGFY-YTTYVSCPILNII 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,494,499
Number of Sequences: 27780
Number of extensions: 355457
Number of successful extensions: 892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)