Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00406
(745 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 98 6e-21
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 97 1e-20
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 96 3e-20
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 95 5e-20
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 43 3e-04
04_04_0401 - 24946801-24947562 42 4e-04
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 36 0.045
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 30 2.2
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 2.2
07_03_1496 + 26986625-26986791,26987757-26987913,26988008-26988055 29 3.9
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 5.2
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 5.2
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 28 6.8
03_02_0221 + 6533643-6533687,6533860-6533955,6535323-6535682,653... 28 9.0
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 98.3 bits (234), Expect = 6e-21
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 238
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 239 MQVCVL 256
M+VC+L
Sbjct: 62 MKVCML 67
Score = 88.6 bits (210), Expect = 5e-18
Identities = 39/67 (58%), Positives = 54/67 (80%)
Frame = +3
Query: 501 SQGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTM 680
++ T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTM
Sbjct: 172 TKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTM 231
Query: 681 GPPQRLY 701
G R++
Sbjct: 232 GKVIRVF 238
Score = 51.2 bits (117), Expect = 8e-07
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Frame = +1
Query: 256 GDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGL 435
GD QH +EA+ + + M SE++IKQIPRLLGPGL
Sbjct: 68 GDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGL 127
Query: 436 NKA----------------------GKFPGLLSHQESMTQKIDEVK 507
NKA GKFP L++HQES+ K++E K
Sbjct: 128 NKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETK 173
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/66 (62%), Positives = 55/66 (83%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 238
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 239 MQVCVL 256
++VC+L
Sbjct: 62 LKVCML 67
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/67 (58%), Positives = 54/67 (80%)
Frame = +3
Query: 501 SQGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTM 680
++ T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTM
Sbjct: 145 TKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTM 204
Query: 681 GPPQRLY 701
G R++
Sbjct: 205 GKVYRVF 211
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = +1
Query: 256 GDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGL 435
GD QH +EA+ + + M SE++IKQIPRLLGPG
Sbjct: 68 GDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPG- 126
Query: 436 NKAGKFPGLLSHQESMTQKIDEVK 507
KFP L++HQES+ K++E K
Sbjct: 127 ----KFPTLVTHQESLESKVNETK 146
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 238
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 239 MQVCVL 256
M+VC+L
Sbjct: 62 MKVCML 67
Score = 94.3 bits (224), Expect = 9e-20
Identities = 39/67 (58%), Positives = 56/67 (83%)
Frame = +3
Query: 501 SQGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTM 680
++ T+KFQ+KKVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTM
Sbjct: 145 TKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTM 204
Query: 681 GPPQRLY 701
G P R++
Sbjct: 205 GKPYRVF 211
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = +1
Query: 256 GDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGL 435
GD QH +EA+ + + M SE++IKQIPRLLGPG
Sbjct: 68 GDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPG- 126
Query: 436 NKAGKFPGLLSHQESMTQKIDEVK 507
KFP L++HQES+ K++E K
Sbjct: 127 ----KFPTLVTHQESLESKVNETK 146
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = +2
Query: 62 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 241
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 242 QVCVL 256
+VC+L
Sbjct: 81 KVCML 85
Score = 93.5 bits (222), Expect = 2e-19
Identities = 39/67 (58%), Positives = 56/67 (83%)
Frame = +3
Query: 501 SQGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTM 680
++ T+KFQ+KKVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTM
Sbjct: 163 TKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTM 222
Query: 681 GPPQRLY 701
G P R++
Sbjct: 223 GKPIRVF 229
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = +1
Query: 256 GDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGL 435
GD QH +EA+ + + M SE++IKQIPRLLGPG
Sbjct: 86 GDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPG- 144
Query: 436 NKAGKFPGLLSHQESMTQKIDEVK 507
KFP L++HQES+ K++E K
Sbjct: 145 ----KFPTLVTHQESLESKVNETK 164
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 540 CLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 674
C + VG +DM ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 195 CSGIKVGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +3
Query: 513 IKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQ 692
++ +++ C +V VGH M +E +NV ++ + + + W+NVR+LH+K+
Sbjct: 143 VELRVEGGTCRAVRVGHAAMAREEAVENVVAAVEAAAACVPRKWRNVRALHVKAPESVAL 202
Query: 693 RLY 701
LY
Sbjct: 203 PLY 205
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 391 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKEPLSSK*RRC 537
E+L QI +L G G + ++ L+ ESMT++ D+++E L + ++C
Sbjct: 1735 ETLRAQIDQLQGDGAEQMNRYQSLMLELESMTKQRDDLQEKLGQEEQKC 1783
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 110 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCV 253
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAV 326
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 585 LAQNVHLSINFLVSLLKKH 641
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>07_03_1496 + 26986625-26986791,26987757-26987913,26988008-26988055
Length = 123
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = -2
Query: 351 DKLFVLIQFFQSLSIHTWHIQGFSLVTM----LLVSRTQTCIFGRGMY 220
+KLF Q+FQ+L+ HT+ + ++T L ++ T + GRG+Y
Sbjct: 66 EKLFKQQQYFQNLTKHTYLKGRYDVITSVAIPLALAGTSLFMIGRGVY 113
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 567 DMTPDELAQNVHLSINFLVSLLKKH 641
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 209 QCRRNACPSVGHSSSDQFEALQSPKS 132
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -1
Query: 697 NLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHNTFFIWN 518
++W P + +C+D +C + + K++ERC + G S + T + F W
Sbjct: 37 HIWDEPYLYRVCSDGLLRRCVPTEEGLKIIERCHA-SPYGGHYSAFRTQAKIWQCGFFWP 95
Query: 517 LM 512
M
Sbjct: 96 TM 97
>03_02_0221 +
6533643-6533687,6533860-6533955,6535323-6535682,
6537106-6537177,6537374-6537697
Length = 298
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 242 AFSAAVCILALQCRRNACPSVGH 174
A A VCI L+CR+ CP H
Sbjct: 110 ASRAEVCIFCLRCRQVLCPRCSH 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,740,513
Number of Sequences: 37544
Number of extensions: 431763
Number of successful extensions: 1118
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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