Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00404
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)         55   5e-08
SB_13139| Best HMM Match : Peptidase_S28 (HMM E-Value=0)               42   4e-04
SB_817| Best HMM Match : Peptidase_S28 (HMM E-Value=0)                 37   0.016
SB_21897| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.19 
SB_52858| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_16645| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     28   9.5  

>SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)
          Length = 1224

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 29/78 (37%), Positives = 42/78 (53%)
 Frame = +2

Query: 257 NATDINSLIEYLESAYVTLAMVNYPFASSFLTPLPAQPVAVVCQYLNQNLANESLLEGIA 436
           +A  IN LI ++ +A+  +AM +YP+A+ FL PLPA PV   C+ L         L G+A
Sbjct: 243 SADQINHLIGWIRNAFTIIAMCDYPYATDFLAPLPANPVNYACKLL---ATASDRLSGLA 299

Query: 437 KAIDVYANYGKKTKQCVD 490
            A  +  N    T +C D
Sbjct: 300 DAAGLAYNGTSGTLKCFD 317



 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTANFKR-NFYCSENIQKSW 179
           GML+AY+R KYP+++  A+AASAPI+    ++  D F   VT +FK  +  C + ++  +
Sbjct: 155 GMLSAYLRFKYPNVIQAALAASAPIYFIADLSIRDFFFPAVTRDFKNADPKCPDLVRAGF 214

Query: 180 -HLIRSYSSSVNGSEYLHKTLNLC 248
             L       + G + + K   LC
Sbjct: 215 IELDNLKKEGLKGLDAISKAFKLC 238


>SB_13139| Best HMM Match : Peptidase_S28 (HMM E-Value=0)
          Length = 563

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +3

Query: 3   GMLAAYIRIKYPHLVAGAIAASAPI 77
           G L+A+ RIKYPHLV GA+A+SAP+
Sbjct: 243 GSLSAWFRIKYPHLVIGAVASSAPV 267



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
 Frame = +1

Query: 532 WDFQACTEM-VMPVCSTGQNDMFEASPWNFTKYSEDCYKKYNVYPRENMARL----EYGG 696
           W +Q+CT+      C  G + +F +         + C + + +   +  AR+    EY G
Sbjct: 443 WYYQSCTQFGYFQTCEPGTHCVF-SKRLGIINDMDLCQEVFEIALGQLKARINFTNEYYG 501

Query: 697 DLLQAASNIVFSYGLLDPW 753
                 S IVF  G +DPW
Sbjct: 502 GKRPRGSKIVFVNGSIDPW 520


>SB_817| Best HMM Match : Peptidase_S28 (HMM E-Value=0)
          Length = 826

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = +3

Query: 3   GMLAAYIRIKYPHLV-----AGAIAASAPIHMFPGMTKCDLFNRIVTANFKRNF-YCSEN 164
           G L+A++R+KYPHL+      GA+A+SAP+           +  +VTA+ +     C++N
Sbjct: 211 GSLSAWLRLKYPHLIHGTTFKGAVASSAPV---LAQLNFPEYLEVVTASLETTGPDCTKN 267

Query: 165 IQKSWHLIRSYSSSVNGSEYLHKTLNLC 248
           I  +   I     +  G++ L     +C
Sbjct: 268 IANATAAIEELLDADEGTKKLTNLFRVC 295


>SB_21897| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 228

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 111 FNRIVTANFKRNF--YCSENIQKSWHLIRSYSSSVNGSEYLHKTLNLC 248
           FN IVT +F R+    C  +I+KSW +I    ++ +G + L    N C
Sbjct: 8   FNEIVTKDFHRDGGDSCVNSIRKSWSVIEKLGATQSGRKTLTSVFNTC 55


>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2516

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 526  GGWDFQACTEMVMPVCSTGQNDMFEASPWNFTKYSEDCYKKY 651
            G WD + C+     VC T         P  ++KY E CY  Y
Sbjct: 1706 GEWDVEVCSGFQGYVCETAPPTPSPDCPSGYSKYGESCYLMY 1747


>SB_52858| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 180

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
 Frame = +1

Query: 532 WDFQACTEMVMPVCSTGQNDMF-EASPWNFTKYS-----EDCYKKYNVYPRENMARLEYG 693
           W +Q CTE      +   N  F +  P  ++         + +   N+          YG
Sbjct: 46  WTYQTCTEFGFYQTTDSDNQPFGKRFPLKYSIQQCMDVFGEAFNSSNLASGIRQTNTNYG 105

Query: 694 GDLLQAASNIVFSYGLLDPWTA 759
           G  + A+S IVF  G +DPW A
Sbjct: 106 GKGI-ASSRIVFPNGSIDPWHA 126


>SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 410 NESLLEGIAKAIDVYANYGKKTKQCVDYKEGDNTKI 517
           NE+ +  +   ++  A   KKTK  ++  EG NTK+
Sbjct: 19  NENEVHSVKNGVETIAPAKKKTKVALESLEGSNTKV 54


>SB_16645| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 337

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +2

Query: 305 VTLAMVNYPFASSFLTPLPAQPVAVVCQYLNQNLANES----LLEGIAKAIDVYANYGK 469
           VTL +V     +++L  L  QP+ V CQ  N  L+ E     LL  +  AI+++   G+
Sbjct: 227 VTLLIVTVASVATWLPWLILQPITVYCQKCNATLSYEPFLLLLLVCVNSAINIFIYAGR 285


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = +2

Query: 86  SRNDEVRSLQ*DRNGQFQ--AEFLLLGKHTKIMALDKELLIISKRFRVSSQNAKSMWGTN 259
           S  D+++S   + +G F+   E LL G   +   ++KEL+       VS+  A+  WGT+
Sbjct: 561 SLTDDMKS---ETSGDFENLLETLLKGSRDESTDVNKELVTKDAAALVSAGVAR--WGTD 615

Query: 260 ATDINSLIEYLESAYVTLAMVNY 328
                +++    SA+V   +  Y
Sbjct: 616 EDQFITILSQRSSAHVQAVLAEY 638


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,714,453
Number of Sequences: 59808
Number of extensions: 524662
Number of successful extensions: 1288
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)