Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00404
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16621-10|AAA28227.1| 507|Caenorhabditis elegans Temporarily as... 73 2e-13
L16621-9|AAL11487.1| 568|Caenorhabditis elegans Temporarily ass... 73 2e-13
L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy ... 67 1e-11
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p... 40 0.002
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 39 0.003
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 39 0.003
L14331-7|AAN65310.1| 510|Caenorhabditis elegans Hypothetical pr... 38 0.006
L14331-6|AAN65311.1| 473|Caenorhabditis elegans Hypothetical pr... 38 0.006
U51993-4|AAB36854.2| 540|Caenorhabditis elegans Hypothetical pr... 36 0.024
U42439-5|AAA83509.2| 542|Caenorhabditis elegans Hypothetical pr... 36 0.024
U42439-4|AAA83508.1| 582|Caenorhabditis elegans Hypothetical pr... 34 0.096
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 32 0.51
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 30 2.1
U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 28 6.3
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC024090-7|AAF35429.2| 294|Caenorhabditis elegans Hypothetical ... 28 8.3
AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box transcr... 28 8.3
>L16621-10|AAA28227.1| 507|Caenorhabditis elegans Temporarily
assigned gene nameprotein 282, isoform a protein.
Length = 507
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Frame = +1
Query: 520 DAGGWDFQACTEMVMPVCSTG-QNDMF-EASPWNFTKYSEDCYKKY-NVYPRENMAR--- 681
D GW FQ CTEMVMP+C +G ND F + P+ KY+E C + + +++ + + R
Sbjct: 356 DPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAEFCMQTFSSIHYNKTLLRPLA 415
Query: 682 --LEYGGDLLQAASNIVFSYGLLDPWTAG 762
L +G L +ASNIVFS G LDPW+ G
Sbjct: 416 GGLAFGATSLPSASNIVFSNGYLDPWSGG 444
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 NATDINSLIEYLESAYVTLAMVNYPFASSFLTPLPAQPVAVVCQYLNQ-NLANESLLEGI 433
N DI L +Y+ + +AMVNYP+ +SFL+ LPA PV C+ +Q E E +
Sbjct: 264 NKDDIGFLKQYIRESMEAMAMVNYPYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQL 323
Query: 434 AKAIDVYANY-GKKTKQCVDYKEGDN 508
K +++Y NY G K+ C + + D+
Sbjct: 324 YKIVNLYYNYTGDKSTHCANAAKCDS 349
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMT-KCDLFNRIVTANFKRNFYCSENIQKSW 179
GML+A+ RIKYPH+V GAIAASAP+ F D+++ IVT F + I+K W
Sbjct: 175 GMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDFIVTRAFLDAGCNRKAIEKGW 234
Query: 180 HLIRSYSSSVNGSEYLH 230
+ + S +G +YL+
Sbjct: 235 IALDELAKSDSGRQYLN 251
>L16621-9|AAL11487.1| 568|Caenorhabditis elegans Temporarily
assigned gene nameprotein 282, isoform b protein.
Length = 568
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Frame = +1
Query: 520 DAGGWDFQACTEMVMPVCSTG-QNDMF-EASPWNFTKYSEDCYKKY-NVYPRENMAR--- 681
D GW FQ CTEMVMP+C +G ND F + P+ KY+E C + + +++ + + R
Sbjct: 417 DPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAEFCMQTFSSIHYNKTLLRPLA 476
Query: 682 --LEYGGDLLQAASNIVFSYGLLDPWTAG 762
L +G L +ASNIVFS G LDPW+ G
Sbjct: 477 GGLAFGATSLPSASNIVFSNGYLDPWSGG 505
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 NATDINSLIEYLESAYVTLAMVNYPFASSFLTPLPAQPVAVVCQYLNQ-NLANESLLEGI 433
N DI L +Y+ + +AMVNYP+ +SFL+ LPA PV C+ +Q E E +
Sbjct: 325 NKDDIGFLKQYIRESMEAMAMVNYPYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQL 384
Query: 434 AKAIDVYANY-GKKTKQCVDYKEGDN 508
K +++Y NY G K+ C + + D+
Sbjct: 385 YKIVNLYYNYTGDKSTHCANAAKCDS 410
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMT-KCDLFNRIVTANFKRNFYCSENIQKSW 179
GML+A+ RIKYPH+V GAIAASAP+ F D+++ IVT F + I+K W
Sbjct: 236 GMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDFIVTRAFLDAGCNRKAIEKGW 295
Query: 180 HLIRSYSSSVNGSEYLH 230
+ + S +G +YL+
Sbjct: 296 IALDELAKSDSGRQYLN 312
>L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy
peptidase like protein1 protein.
Length = 565
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +2
Query: 257 NATDINSLIEYLESAYVTLAMVNYPFASSFLTPLPAQPVAVVCQYLNQN---LANESLLE 427
N TD +L YL A +AMV+YP+ + FL PLPA PV V C Y+N N +++ L++
Sbjct: 271 NQTDGWNLNAYLREAIEYMAMVDYPYPTGFLEPLPAWPVTVACGYMNANGTSFSDKDLVK 330
Query: 428 GIAKAIDVYANYGKKTK--QCVDY 493
+A A ++Y NY + C+D+
Sbjct: 331 AVANAANIYYNYNRDPNFTYCIDF 354
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Frame = +1
Query: 520 DAGGWDFQACTEMVMPVC-STGQNDMF--EASPWNFTKYSEDC---YKKYNVYPRE---N 672
D GW +Q C+E++M +C S G ND+F E + + C +K P+ +
Sbjct: 368 DELGWPWQECSEIIMAMCASGGSNDVFWNECGKDIYQTLQQGCVSIFKSMGWTPKNWNID 427
Query: 673 MARLEYGGDLLQAASNIVFSYGLLDPWTAG 762
+ YG D L +SN++ + G LDPW+ G
Sbjct: 428 AVKTLYGYD-LSGSSNLILTQGHLDPWSGG 456
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAP-IHMFPGMTKCDLFNRIVTANFKRNFYCSENIQKSW 179
GML+A+ R KYPH+V GA A SAP I+M G F+ I + + N + +W
Sbjct: 180 GMLSAWFRQKYPHIVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTYIDNGCNRFILANAW 239
Query: 180 HLIRSYSSSVNGSEYLH 230
+ + SS+ G ++L+
Sbjct: 240 NATLNLSSTDAGRQWLN 256
>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.11 protein.
Length = 1080
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRI-VTANFKR--NFYCSENIQK 173
G ++A++R +P LV GA+A+S P++ K D + + V N R N C++NIQ
Sbjct: 703 GAMSAWMREVFPDLVVGAVASSGPVY-----AKTDFYEYLMVVENSVRRYNSKCADNIQS 757
Query: 174 SWHLIRSYSSSVNGSEYLHKTLNL 245
+ IR+ + G + L L
Sbjct: 758 GFDAIRTLFLTKEGRQNLSSIFQL 781
Score = 33.1 bits (72), Expect = 0.22
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +1
Query: 517 LDAGGWDFQACTEMV-MPVCSTGQNDMFEAS-PWN-FTKYSEDCYKKYNVYP---RENMA 678
LD W +Q CTE + +N +F A P + F D + N+ R+ +
Sbjct: 351 LDQRMWQYQTCTEFGWFYTTNNNENGLFGAVVPGSLFLNQCFDIFPDANLTATSIRDLVI 410
Query: 679 RLE--YGGDLLQAASNIVFSYGLLDPWT 756
YG + +N VF+ GLLDPWT
Sbjct: 411 EYNNYYGSAFDYSGTNAVFTNGLLDPWT 438
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Frame = +1
Query: 532 WDFQACTEMVMPVCSTGQNDMFEASPWNFTKYSEDCYKKYN-VYPRENM------ARLEY 690
W +Q C+E + N +F SP Y + C +N Y R ++ +Y
Sbjct: 889 WTWQTCSEFGYFQSADSGNGIF-GSPTPVNMYVQMCMDVFNNQYQRTSIDYSIANTNYKY 947
Query: 691 GGDLLQAASNIVFSYGLLDPWTA 759
G +N+V G +DPW A
Sbjct: 948 GERFHYRGTNVVLPNGNVDPWHA 970
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTA-NFKR--NFYCSENIQK 173
G+++A+ R +P LV GA+A+SAP+ K D + ++ A N R N C++ IQ+
Sbjct: 701 GLISAWTREVFPELVVGAVASSAPV-----FAKTDFYEYLMVAENSIRSYNSTCADRIQE 755
Query: 174 SWHLIRSYSSSVNGSEYLHKTLNL 245
++ +R+ + G + L L
Sbjct: 756 GFNSMRALFLTKGGRQTLSSMFKL 779
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Frame = +1
Query: 532 WDFQACTEMVMPVCSTGQNDMFEA-SPWNFTKYSEDCYKKYNVY-------PRENMARLE 687
W +Q C+E + N +F + +P NF + + C +N Y P +
Sbjct: 888 WTWQTCSEFGYFQSADSGNGIFGSPTPVNF--FIQICMDVFNNYYQRSAIDPMVDNTNYM 945
Query: 688 YGGDLLQAASNIVFSYGLLDPWTA 759
YG SN+VF G DPW A
Sbjct: 946 YGERFHFRGSNVVFPNGNKDPWHA 969
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTA-NFKR--NFYCSENIQK 173
G+++A+ R +P LV GA+A+SAP+ K D + ++ A N R N C++ IQ+
Sbjct: 701 GLISAWTREVFPELVVGAVASSAPV-----FAKTDFYEYLMVAENSIRSYNSTCADRIQE 755
Query: 174 SWHLIRSYSSSVNGSEYLHKTLNL 245
++ +R+ + G + L L
Sbjct: 756 GFNSMRALFLTKGGRQTLSSMFKL 779
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Frame = +1
Query: 532 WDFQACTEMVMPVCSTGQNDMFEA-SPWNFTKYSEDCYKKYNVY-------PRENMARLE 687
W +Q C+E + N +F + +P NF + + C +N Y P +
Sbjct: 888 WTWQTCSEFGYFQSADSGNGIFGSPTPVNF--FIQICMDVFNNYYQRSAIDPMVDNTNYM 945
Query: 688 YGGDLLQAASNIVFSYGLLDPWTA 759
YG SN+VF G DPW A
Sbjct: 946 YGERFHFRGSNVVFPNGNKDPWHA 969
>L14331-7|AAN65310.1| 510|Caenorhabditis elegans Hypothetical
protein K12H4.7a protein.
Length = 510
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTANFKRN-FYCSENIQKSW 179
G LAA+ R K+P LV A+ +S P+ + + +V + RN C+ ++ + +
Sbjct: 190 GALAAWTRAKHPELVYAAVGSSGPVQAEVDFKE---YLEVVQNSITRNSTECAASVTQGF 246
Query: 180 HLIRSYSSSVNGSEYLHKTLNLC 248
+L+ S + +G + L +LC
Sbjct: 247 NLVASLLQTSDGRKQLKTAFHLC 269
>L14331-6|AAN65311.1| 473|Caenorhabditis elegans Hypothetical
protein K12H4.7b protein.
Length = 473
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTANFKRN-FYCSENIQKSW 179
G LAA+ R K+P LV A+ +S P+ + + +V + RN C+ ++ + +
Sbjct: 190 GALAAWTRAKHPELVYAAVGSSGPVQAEVDFKE---YLEVVQNSITRNSTECAASVTQGF 246
Query: 180 HLIRSYSSSVNGSEYLHKTLNLC 248
+L+ S + +G + L +LC
Sbjct: 247 NLVASLLQTSDGRKQLKTAFHLC 269
>U51993-4|AAB36854.2| 540|Caenorhabditis elegans Hypothetical
protein F56F10.1 protein.
Length = 540
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHM 83
G LAA+ R KYP L G++A+SAP+++
Sbjct: 185 GSLAAWFRQKYPQLTVGSVASSAPVNL 211
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Frame = +1
Query: 523 AGGWDFQACTEM-VMPVCSTGQNDMFEASPWNF-----TKYSEDCYKKYNVYPRENMARL 684
A GW + C E+ + + G N P N T D K + ++
Sbjct: 373 ARGWMWLCCNEIGFLQTTNQGNNVFGTGVPLNLFIDMCTDMFGDSMKMSQIMGGNKKSQN 432
Query: 685 EYGGDLLQAASNIVFSYGLLDPWTA 759
YGG A+N+V G LDPW A
Sbjct: 433 YYGGADFYNATNVVLPNGSLDPWHA 457
>U42439-5|AAA83509.2| 542|Caenorhabditis elegans Hypothetical
protein F19C7.4 protein.
Length = 542
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +1
Query: 532 WDFQACTEMVMPVCSTGQNDMFEASPWNFTKYSEDC-------YKKYNVYPRENMARLEY 690
W +Q CTE+ + G N S +++ C Y N + + R +Y
Sbjct: 377 WIWQTCTELGYYQTTDGGNGGIFGSTVPLDFFADQCIDLFGPEYTLDNTFKLVDQVRTKY 436
Query: 691 GGDLLQAASNIVFSYGLLDPW 753
GG +N+VF G DPW
Sbjct: 437 GGAGTYRGTNVVFPNGSFDPW 457
Score = 34.3 bits (75), Expect = 0.096
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMF 86
G L+A+ R YP + AGA+++S+ +H+F
Sbjct: 188 GSLSAFFRETYPEMTAGAVSSSSAVHVF 215
>U42439-4|AAA83508.1| 582|Caenorhabditis elegans Hypothetical
protein F19C7.2 protein.
Length = 582
Score = 34.3 bits (75), Expect = 0.096
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMF 86
G L+A+ R YP + AGA+++S+ +H+F
Sbjct: 188 GSLSAFFRETYPEMTAGAVSSSSAVHVF 215
Score = 34.3 bits (75), Expect = 0.096
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +1
Query: 532 WDFQACTEMVMPVCSTGQNDMFEASPWNFTKYSEDC-------YKKYNVYPRENMARLEY 690
W +Q CTE+ + G N S +++ C Y N + + R +Y
Sbjct: 419 WIWQTCTELGYYQTTDGGNGGIFGSTVPLDFFADQCIDLFGPEYTLDNTFKLVDQVRTKY 478
Query: 691 GGDLLQAASNIVFSYGLLDPW 753
GG +N+ F G DPW
Sbjct: 479 GGADAYRGTNVCFPNGSFDPW 499
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 188 KELLIISKRFRVSSQNAKSMWGTNATDINSLIEYLESAYVTLAMVNYP 331
+++ + SK F SS+NA + D+N +E L+ Y+ L +V+YP
Sbjct: 68 EDIYLTSKVFPYSSKNAAELI---RKDVNESLELLDRKYLDLVLVHYP 112
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 532 WDFQACTEMV-MPVCSTGQNDMFEAS-PWNFTKYSEDCYKKYNVYPRENMARLEY----- 690
W +Q CTE+ P + + +F A P + Y C +++P ++
Sbjct: 354 WTYQICTELGWFPTTNNNEQGLFGAVVPTSI--YINQCS---DIFPDASLTATSIRDSIV 408
Query: 691 GGDLLQAASNIVFSYGLLDPWT 756
D + +N+VF+ G DPW+
Sbjct: 409 SSDSVYTGTNVVFTNGFYDPWS 430
>U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical
protein C26B9.5 protein.
Length = 516
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +3
Query: 3 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTANFKRNFYCSENIQKSWH 182
G L+A R +YP GA+A+SAP+ + + V K + C N+ +++
Sbjct: 187 GTLSALFRQQYPADTVGAVASSAPLDWTLDFFEYAMVVEDVLK--KTSVDCWRNVNQAFL 244
Query: 183 LIRSYSSSVNGSEYLHKTLNLCGA 254
++ S + G + L+ NL A
Sbjct: 245 NMQQLSLTKAGIQQLNTYFNLVPA 268
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 651 VFLVAIFRIFGKVPRRRFEHIIL 583
+FL+A ++FG+ P R+F I+L
Sbjct: 160 IFLIAAVKVFGRKPHRKFILIVL 182
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 583 APSNKQALPSLCTPESPSRLRPNFGIVP 500
AP+ + +P L TPE P P F VP
Sbjct: 139 APARSKTVPDLATPELPIPQPPRFAEVP 166
>Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical
protein T07C4.6 protein.
Length = 292
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 269 INSLIEYLESAYVTLAMVNYPFASSFLTPLPAQP 370
IN + Y V +PFA FL+PLP+ P
Sbjct: 234 INPFLFYFPHMLSENLPVQFPFAFPFLSPLPSTP 267
>AC024090-7|AAF35429.2| 294|Caenorhabditis elegans Hypothetical
protein C52E2.1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +2
Query: 215 FRVSSQNAKSMWGTNATDINSLIEYLESAYVTLAMVNYPFASSFLTPLPAQ----PVAVV 382
F + S N+ A +++ ++++E V A + F ++ P Q P+ V
Sbjct: 31 FSLVSPNSVRSLNIRAANVSVTLDFIEIFLVEAAGTHSMF---YIKPKSHQNREFPIHPV 87
Query: 383 CQYLNQNLANESLLEGIAKAIDV 451
C++LN+N + E +++ A+++
Sbjct: 88 CRWLNRNFSIEKIIKNFLVALNL 110
>AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box
transcription factor TBX-9 protein.
Length = 292
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 269 INSLIEYLESAYVTLAMVNYPFASSFLTPLPAQP 370
IN + Y V +PFA FL+PLP+ P
Sbjct: 234 INPFLFYFPHMLSENLPVQFPFAFPFLSPLPSTP 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,299,976
Number of Sequences: 27780
Number of extensions: 398754
Number of successful extensions: 1043
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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