Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00403
(756 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 157 4e-37
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 152 1e-35
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 150 3e-35
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 141 2e-32
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 134 3e-30
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 125 1e-27
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 120 3e-26
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 117 3e-25
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 113 3e-24
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 113 3e-24
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 105 9e-22
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 93 5e-18
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 78 3e-13
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 75 1e-12
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 73 6e-12
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 71 3e-11
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 69 2e-10
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 65 2e-09
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 64 4e-09
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 59 1e-07
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 59 1e-07
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 56 1e-06
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 55 2e-06
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 54 4e-06
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 54 4e-06
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 54 5e-06
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 53 9e-06
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 52 1e-05
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 52 1e-05
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 52 2e-05
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 44 0.005
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 44 0.005
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 42 0.016
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 42 0.022
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 41 0.029
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.066
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 39 0.15
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 39 0.15
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.35
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 37 0.62
UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3; ... 37 0.62
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.62
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 36 0.82
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 36 1.1
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 36 1.1
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 36 1.1
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 36 1.4
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 36 1.4
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 36 1.4
UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium ja... 35 1.9
UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox p... 35 2.5
UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens "Keratin... 35 2.5
UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2; ... 35 2.5
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 34 3.3
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 34 3.3
UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 3.3
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 34 4.4
UniRef50_UPI000051A4EF Cluster: PREDICTED: similar to murashka C... 34 4.4
UniRef50_Q3JNJ8 Cluster: Putative uncharacterized protein; n=10;... 34 4.4
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 34 4.4
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 5.8
UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein P0419B... 33 5.8
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 33 5.8
UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmod... 33 5.8
UniRef50_A7SGQ8 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.8
UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;... 33 5.8
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole... 33 7.6
UniRef50_Q6AQX9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_Q3JRY2 Cluster: Pristinamycin I synthase 3 and 4; n=2; ... 33 7.6
UniRef50_A0VKY2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 33 7.6
UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene pro... 33 7.6
UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1; Acantha... 33 7.6
UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor; ... 33 7.6
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 157 bits (380), Expect = 4e-37
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QRL+KV+G
Sbjct: 15 PKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVRTDPTYPAG+MDV+++EKT E F
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFF 99
Score = 146 bits (355), Expect = 4e-34
Identities = 65/85 (76%), Positives = 74/85 (87%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI NDS
Sbjct: 100 RLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDS 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
+Q+DIA+ KI D+IKF+SGNLCMIT
Sbjct: 160 VQVDIASGKITDYIKFDSGNLCMIT 184
Score = 140 bits (339), Expect = 3e-32
Identities = 63/75 (84%), Positives = 70/75 (93%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 688
GGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG+
Sbjct: 185 GGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGV 244
Query: 689 RLTIAEERDKRIAAK 733
+L+IAEERDKR+AAK
Sbjct: 245 KLSIAEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 152 bits (368), Expect = 1e-35
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK++G
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVRTD TYPAGFMDV+SI+KT E F
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENF 99
Score = 149 bits (362), Expect = 6e-35
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+
Sbjct: 100 RLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDT 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMITEAVTWG 527
IQ+D+ T KI DFIKF++GNLCM+T G
Sbjct: 160 IQIDLETGKITDFIKFDTGNLCMVTGGANLG 190
Score = 132 bits (319), Expect = 9e-30
Identities = 57/75 (76%), Positives = 69/75 (92%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 688
GG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +ISLPRGKGI
Sbjct: 185 GGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGI 244
Query: 689 RLTIAEERDKRIAAK 733
RLTIAEERDKR+AAK
Sbjct: 245 RLTIAEERDKRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 150 bits (364), Expect = 3e-35
Identities = 68/85 (80%), Positives = 75/85 (88%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK++G
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVRTD TYP GFMDV+SI+KT E F
Sbjct: 75 KVRTDITYPTGFMDVISIDKTGEHF 99
Score = 135 bits (326), Expect = 1e-30
Identities = 58/75 (77%), Positives = 70/75 (93%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 688
GG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLPRGKGI
Sbjct: 217 GGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGI 276
Query: 689 RLTIAEERDKRIAAK 733
RLTIAEERDKR+AAK
Sbjct: 277 RLTIAEERDKRLAAK 291
Score = 105 bits (253), Expect(2) = 9e-29
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +3
Query: 315 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 494
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 495 LCMITEAVTWG 527
+CM+T G
Sbjct: 212 MCMVTGGANLG 222
Score = 44.4 bits (100), Expect(2) = 9e-29
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAK 317
RLIYDVKGRFT+HRIT EEAK
Sbjct: 100 RLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 141 bits (341), Expect = 2e-32
Identities = 64/85 (75%), Positives = 73/85 (85%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+ QR I+V+G
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVRTD TYPAGFMDVVSI KTNE F
Sbjct: 75 KVRTDKTYPAGFMDVVSIPKTNENF 99
Score = 123 bits (296), Expect = 5e-27
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+YD KGRF +H I EEAK+KLCKV+ + G K +PYL T+DGRTIRYPDPLIK ND+
Sbjct: 100 RLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDT 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
I+LD+ KI++FIKF+ GN+ M+T
Sbjct: 160 IKLDLEENKIVEFIKFDVGNVVMVT 184
Score = 116 bits (280), Expect = 5e-25
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = +2
Query: 485 VWELVYDHGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 664
V +V GGRN GRVG I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++
Sbjct: 177 VGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWV 236
Query: 665 SLPRGKGIRLTIAEERDKRIAAKVAA 742
SLP+GKGI+LTI EE KR+A++ AA
Sbjct: 237 SLPKGKGIKLTIIEEARKRLASQQAA 262
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 134 bits (323), Expect = 3e-30
Identities = 57/87 (65%), Positives = 70/87 (80%)
Frame = +3
Query: 267 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 446
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 447 IATTKIMDFIKFESGNLCMITEAVTWG 527
+ T KI DF KF++GNLCM+T G
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLG 162
Score = 110 bits (264), Expect = 4e-23
Identities = 46/70 (65%), Positives = 59/70 (84%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 688
GG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+N+F+IGKG +ISLP GKGI
Sbjct: 157 GGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNIPWISLPHGKGI 216
Query: 689 RLTIAEERDK 718
R TIAEE+ +
Sbjct: 217 RFTIAEEKKR 226
Score = 107 bits (256), Expect = 4e-22
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q IK++G
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQHFIKMDG 74
Query: 181 K 183
K
Sbjct: 75 K 75
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 125 bits (302), Expect = 1e-27
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IVK R IK++G
Sbjct: 15 PHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
K+RTD YP GFMDV+SI +T E F
Sbjct: 75 KIRTDTRYPVGFMDVLSIPRTKENF 99
Score = 103 bits (246), Expect = 6e-21
Identities = 43/84 (51%), Positives = 64/84 (76%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+Y+ K RF + +T E+AK+KLCK+++ G +PY+VTHDGRTIRYP P ++ ND+
Sbjct: 100 RLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDT 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMI 506
I+L++ T KI+DF+KF+ GN M+
Sbjct: 160 IKLNLETGKIVDFVKFDIGNTAMM 183
Score = 96.7 bits (230), Expect = 5e-19
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 688
GG +GRVG IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++LP KGI
Sbjct: 185 GGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGI 244
Query: 689 RLTIAEERDKRI 724
+ + ++ ++ I
Sbjct: 245 KKPLLQQVNETI 256
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 120 bits (290), Expect = 3e-26
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+RL+KV+G
Sbjct: 29 PHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDG 88
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVRT+ YP G MDV+ + K+NELF
Sbjct: 89 KVRTNYRYPTGLMDVIELGKSNELF 113
Score = 95.1 bits (226), Expect = 2e-18
Identities = 39/85 (45%), Positives = 61/85 (71%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R+IYD KGRF +H I +EA +KL +V + G K +P++VTHDGRTI Y DP ++V+D+
Sbjct: 114 RIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDA 173
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
++ +I T ++ IKF+ G++ M+T
Sbjct: 174 LKFNIKTGEVESVIKFKVGDVAMVT 198
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +2
Query: 512 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 691
G N+GRVGTI E+ SFDIVH+KD++G FATR+ NVF+IG+ ISLP +G+R
Sbjct: 200 GGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVR 259
Query: 692 LTIAE 706
+I E
Sbjct: 260 PSILE 264
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 117 bits (282), Expect = 3e-25
Identities = 58/82 (70%), Positives = 64/82 (78%)
Frame = +1
Query: 10 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVR 189
WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI Q IKV+GK+R
Sbjct: 29 WMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKICMQWFIKVDGKIR 87
Query: 190 TDPTYPAGFMDVVSIEKTNELF 255
TD P MDV+SI+K E F
Sbjct: 88 TDNNLPYWIMDVISIDKMGEDF 109
Score = 114 bits (275), Expect = 2e-24
Identities = 49/90 (54%), Positives = 67/90 (74%)
Frame = +3
Query: 258 LIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSI 437
LIY + RF +HRITPEE KYKLCK++++ K +P+LV HD T+R+PD LIKVND+I
Sbjct: 111 LIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTI 170
Query: 438 QLDIATTKIMDFIKFESGNLCMITEAVTWG 527
Q+D+ T KI +KF++GNLC++T WG
Sbjct: 171 QIDLETGKI-TALKFDTGNLCLVTGGGNWG 199
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 673
GG N GR+G I +RERHP SFD H+KD+ ++F+ +F+I KG K +ISLP
Sbjct: 194 GGGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 113 bits (273), Expect = 3e-24
Identities = 50/91 (54%), Positives = 68/91 (74%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++YD G F +HRIT +E+ +KLCKV RV+ G K +PY+VTHDGRTIR+P+ LIK NDS
Sbjct: 100 RVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDS 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMITEAVTWG 527
I LD+ K++DFIKF G+LC++ + G
Sbjct: 160 IVLDLLNNKVIDFIKFSIGSLCVVIKGSNIG 190
Score = 105 bits (251), Expect = 2e-21
Identities = 46/83 (55%), Positives = 62/83 (74%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+K+ I V+G
Sbjct: 15 PKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNEIYVDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNE 249
KVR D +PAG MDV+SI+ T E
Sbjct: 75 KVRADKNFPAGVMDVISIKTTKE 97
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 691
G N+GR+G ++ GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR +G+R
Sbjct: 186 GSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLR 245
Query: 692 -LTIAEERD 715
LT + E D
Sbjct: 246 TLTKSLEHD 254
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 113 bits (273), Expect = 3e-24
Identities = 52/85 (61%), Positives = 61/85 (71%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I++Q L+ V+
Sbjct: 12 PKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDN 71
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
R D YPAGFMDVV I KT + F
Sbjct: 72 HPRRDGKYPAGFMDVVEIPKTGDRF 96
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYISLPRGKG 685
GG N GR+G IV E HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G
Sbjct: 182 GGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQG 241
Query: 686 IRLTIAEERDKRIAAKVA 739
+R+ + +ER++R+ A A
Sbjct: 242 LRMNVIQEREERLIAAEA 259
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/91 (41%), Positives = 51/91 (56%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+YDVKGRF + ++ EA+ KL KV + T VP VTHDG IRYPDP + D+
Sbjct: 97 RLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDT 156
Query: 435 IQLDIATTKIMDFIKFESGNLCMITEAVTWG 527
I ++ K +D IK G ++T G
Sbjct: 157 IVYNVKEKKCVDLIKNRQGKAVIVTGGANRG 187
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 105 bits (253), Expect = 9e-22
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD RTIR+P+P IK+ D+
Sbjct: 212 RILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDT 271
Query: 435 IQLDIATTKIMDFIKFESGNLCMITE 512
++ D+ KI +F ESGN+C I +
Sbjct: 272 LKYDLVNNKIENFAHLESGNVCYIQQ 297
Score = 93.9 bits (223), Expect = 4e-18
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +2
Query: 500 YDHGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 679
Y G N+GRVG I E+H GSFDI H+KD+ G+ FATRL N+F++G+G K++I LP G
Sbjct: 294 YIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSG 353
Query: 680 KGIRLTIAEERDKRIA 727
G+R TI EER ++ +
Sbjct: 354 DGVRETILEERKRKFS 369
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 APRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVEGKVRTDPTYPAG 213
A RPS GPHKLRE LPL + L+ RL YAL G +V I+ K++ + V+GKVR D YP G
Sbjct: 138 ATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTG 197
Query: 214 FMDVVSIEKTNELF 255
MDVV IEKT++ F
Sbjct: 198 LMDVVRIEKTDQSF 211
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 93.5 bits (222), Expect = 5e-18
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+ ++ IKV G
Sbjct: 15 PKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKNIKVNG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
+VRT+ +P G DVVSIEKT E F
Sbjct: 75 RVRTNSHFPVGLFDVVSIEKTGEHF 99
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/74 (36%), Positives = 50/74 (67%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++Y+V +F +HRI+ EEA Y+L KV + + +PY+V+ G +IR+ DP I + +
Sbjct: 100 RVLYNVHKKFHLHRISSEEASYRLTKVTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYT 158
Query: 435 IQLDIATTKIMDFI 476
I++ T+K++++I
Sbjct: 159 IKISNETSKVIEYI 172
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVE 177
P W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+ + +KV+
Sbjct: 10 PAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVD 69
Query: 178 GKVRTDPTYPAGFMDVVSIEKTNELF 255
G VR D +P G MDV+ I T E++
Sbjct: 70 GVVRRDYKFPVGLMDVIEIVPTGEVY 95
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVE 177
P AW + K GG +APRP GPH + +PL+I +R+ L YA E KI+ + I V+
Sbjct: 18 PYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITRGEIYVD 77
Query: 178 GKVRTDPTYPAGFMDVVSIEKTNELF 255
G VR +P +P G MDVV I +T + +
Sbjct: 78 GVVRKEPKFPVGIMDVVEIPRTGDRY 103
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 73.3 bits (172), Expect = 6e-12
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ + +KV+G
Sbjct: 10 PEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKGYVKVDG 69
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVR D YP G MDV+ + NE +
Sbjct: 70 KVRRDYKYPVGLMDVIELTPINEYY 94
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P+ W + + +A +P GPH + LPL++ +RN L YA T E K++ + +V+G
Sbjct: 16 PRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVDG 75
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
VR D +P GFMDV+ + T E F
Sbjct: 76 VVRKDYKFPVGFMDVIEVVDTGEKF 100
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 509 GGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 679
GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG + ISLP G
Sbjct: 194 GGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P W L + + RPS GPH + + LPL++ +R+ LKYA E KI++ I ++G
Sbjct: 16 PANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDG 75
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELFV 258
R + +PAG MDV+SI + +E ++
Sbjct: 76 LKRKEYKHPAGLMDVLSIPEMDETYL 101
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 491 ELVYDHGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 646
+L Y GG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 186 KLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P W + + V+ +PS GPH L +P+ I LR+ YA T E +I+ R+I+V+G
Sbjct: 18 PPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASRVIEVDG 77
Query: 181 KVRTDPTYPAGFMDVVSI 234
+V TD +P G MDV+ I
Sbjct: 78 RVVTDYKFPVGLMDVLHI 95
Score = 38.3 bits (85), Expect = 0.20
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI-------RYPDP 413
R++ D + I PEEA YKL +++R T HDGR + Y
Sbjct: 103 RVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTA 162
Query: 414 L-IKVNDSIQLDIATTKIMDFIKFESGNLCMITE 512
+ K D++ + I I+ + FE G L ++ +
Sbjct: 163 ISYKTYDALLITIPRQSIVSHVPFEVGTLAIVVD 196
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK W + + +PS G H + L L + +R+ LK A E +I+ + V+G
Sbjct: 16 PKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSGNVLVDG 75
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
+V D +P GFMD++ I KT E++
Sbjct: 76 RVIKDYKFPVGFMDIIEIPKTGEVY 100
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ + + V+G
Sbjct: 12 PRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEGKVLVDG 71
Query: 181 KVRTDPTYPAGFMDVVSIEKTN 246
KVR D Y G D +SI N
Sbjct: 72 KVRKDYRYTVGMFDTISIPAIN 93
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++ + G+F H + +A K+CK+ L HDG T+ + K DS
Sbjct: 97 RVVIGMDGKF--HLVPVTDASAKICKIVNKTALRGGKIQLNLHDGTTMIASNDY-KTKDS 153
Query: 435 IQLDIATTKIMDFIKFESGNLCMITE 512
+ L + KI + G+L M+TE
Sbjct: 154 VILKMPERKIDQHFTYAVGSLVMVTE 179
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +1
Query: 46 RPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVRTDPTYPAGFMDV 225
R GPHK++E +PL I L+ LK T E +I+ + V+GKVR D YP G MDV
Sbjct: 25 RSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDV 84
Query: 226 VSI 234
V I
Sbjct: 85 VEI 87
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++Y+ +G + + T E A KL KV+ P N L THDGRT D KV D
Sbjct: 94 RVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDV 153
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
+ + KI + IK + GN IT
Sbjct: 154 WAVSVPDMKISEIIKMQPGNKAYIT 178
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +1
Query: 37 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVRTDPTYPAGF 216
+ P P+ G H + + L+ +R+ LK + E +I+ L+KV+GK + + GF
Sbjct: 23 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGF 82
Query: 217 MDVVSI 234
MDV+ I
Sbjct: 83 MDVIEI 88
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++ G+ T++ I E K+CKV ++ ++T D R ++ IKV DS
Sbjct: 100 RVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDS 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMITEAVTWGVWA 536
+ + +I+ +KFE G+LC+IT G A
Sbjct: 160 LLIKTINDEIVYALKFEVGSLCLITRGKHLGTIA 193
Score = 37.9 bits (84), Expect = 0.27
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 31 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVRTDPTYPA 210
G++ + S+GPH + + L+ ++ A E K+VK + V GK +P
Sbjct: 25 GIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPI 84
Query: 211 GFMDVVSIEKTNE 249
MD +S N+
Sbjct: 85 SLMDTISFPLANK 97
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +1
Query: 49 PSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVRTDPTYPAGFMDVV 228
P+ H + +P++I LR+ LK E+ +I+ ++KV+G++ D +P GFMDV+
Sbjct: 28 PTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVL 87
Query: 229 SIE 237
SI+
Sbjct: 88 SID 90
Score = 38.3 bits (85), Expect = 0.20
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 LIYDVKGRFTIHRITPEEAKYKLCKV-KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
++YD KG+ I + P KL KV K+ G + L HDG+TI I +D
Sbjct: 98 IVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKIQ-LGFHDGKTIVTDRKDINTSDV 156
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
+ + I +I + +K G+ IT
Sbjct: 157 LLMKIPDLEIENVLKIAEGDKVFIT 181
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK+W + + G + GPH LPL + +R+ LK E +I+ + + V+G
Sbjct: 10 PKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDG 69
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
R D +P G DV+++ NE +
Sbjct: 70 ISRKDLRFPVGLFDVITLPLVNEAY 94
Score = 39.5 bits (88), Expect = 0.088
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++ D KGR ++++ KLC++ T L +DG I + DS
Sbjct: 95 RMLQDEKGRLVLYKLNETNVN-KLCRINNKTTVKGGKIQLNLNDGTNILGSNDY-GTKDS 152
Query: 435 IQLDIATTKIMDFIKFESGNLCMI 506
+ L I ++ +KFE GNL M+
Sbjct: 153 LILSIPDKHVVKHLKFEVGNLAMV 176
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK+W + K + GPH + +PL + LR+ L E +++ + + V+G
Sbjct: 11 PKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGNVLVDG 70
Query: 181 KVRTDPTYPAGFMDVVSIEKTN 246
R D +P G MD+++I N
Sbjct: 71 VARKDLRFPVGLMDIITIPLNN 92
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R++ D K R ++++ A KLC+++ + + + +DG I + DS
Sbjct: 96 RVMLDGKSRLVLNKLDGTGAD-KLCRIEGKTSIKEGKIQMRLNDGVNIIGSNNY-NTKDS 153
Query: 435 IQLDIATTKIMDFIKFESGNLCMI 506
I L + K++ IK+E GNL MI
Sbjct: 154 IILSVPDKKVVKHIKYEVGNLAMI 177
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVE 177
P+ W + K G + +PS GPH +P+ ++LR+ L A EV ++ + V+
Sbjct: 15 PRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVD 74
Query: 178 GKVRTDPTYPAGFMDVVSIEKTNELF 255
G+ D +P G DV++I + NE +
Sbjct: 75 GRPIKDYKFPVGLFDVLAIPEINEYY 100
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = -3
Query: 718 LVPFLGDGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHD 539
L+ F+ DGE D LA +RD RL A D EHV + R + ++ GVL VHN EG + LA D
Sbjct: 27 LLLFVDDGELDTLALGKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALD 86
Score = 41.1 bits (92), Expect = 0.029
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = -2
Query: 506 DHTQVPRLKLDEVHNLRSCDV*LDGIVDFDKWVWVADGAAIMRYQVRNILRSGRHTLDFT 327
DH Q ++LD + +L DV +G+ D + V +GAA+++ R+ L
Sbjct: 98 DHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLA 157
Query: 326 QLVLSLLRGDTVDCESALNIID 261
QLVL D V ES+L ++D
Sbjct: 158 QLVLRFDSLDAVHNESSLGVVD 179
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P++W L + ++ +P+ G H C+PL + LR+ L A E +++ R + V+G
Sbjct: 12 PRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATRQVLVDG 71
Query: 181 KVRTDPTYPAGFMDVVSI 234
++ TD G MDV+++
Sbjct: 72 RIETDLGRGVGLMDVLTV 89
Score = 37.5 bits (83), Expect = 0.35
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD-PLIKVND 431
R I DV G+ I+ + A KLC+V +T + HDGR I D L D
Sbjct: 95 RCILDVNGKLRYRSISDKAAASKLCRVMGKSTITDGKTQIHLHDGRNILVSDAKLYDSGD 154
Query: 432 SIQLDIATTKIMDFIKFESGNLCMITEAVTWGVWAPSCPARDIPAPS 572
++ + + + F G +T G+ A +RDI S
Sbjct: 155 TLVISLPDQSVAGHHPFSKGATAYLTGGSHIGITA-KVVSRDIKRSS 200
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R + + G
Sbjct: 10 PDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQVLLNG 68
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELFV 258
+ TD D++S K ++ ++
Sbjct: 69 HIVTDEHIGIDVFDIISFPKIDKHYM 94
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P+ + + +A G HK +PL+I LR+ LK E+ +I+ L+ V+G
Sbjct: 11 PRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSLVMVDG 70
Query: 181 KVRTDPTYPAGFMDVVSIEKTNEL 252
KV + GFMD +++ + L
Sbjct: 71 KVVKERRRGIGFMDTLTVSGNDYL 94
Score = 37.9 bits (84), Expect = 0.27
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = +3
Query: 264 YDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQL 443
YD KG+ I E KL +VK + HDG T+ IK DS+ +
Sbjct: 97 YDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLV 156
Query: 444 DIATTKIMDFIKFESGNLCMIT 509
I +I+D +KF GN IT
Sbjct: 157 KIPKKEIVDVLKFAPGNRVFIT 178
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P +W +++ + + GPH +PL+I LR+ L YA E + + + + G
Sbjct: 11 PNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNEDNVLING 69
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
K +D P G D+++ + E +
Sbjct: 70 KAISDEERPVGMFDILAFTEREEYY 94
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = +1
Query: 583 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRRAV 747
H+G TH R + RQGH+ V AA R GHP HHR G Q R G+ V
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQSGV 77
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 41.5 bits (93), Expect = 0.022
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = -3
Query: 733 LGCDALVPFLGDGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMS 554
LGC L+ D + D L R+R RL LA+ EH+ Q + + G+L+V ++G +
Sbjct: 88 LGCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVL 147
Query: 553 LAGHDGAHTPQVTAS 509
L D ++T V ++
Sbjct: 148 LPVLDDSNTAPVPST 162
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 41.1 bits (92), Expect = 0.029
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P W + + G + G H +P + LR+ L T E K + ++V+G
Sbjct: 16 PSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSGNVEVDG 75
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
RT + G MDVV + T +++
Sbjct: 76 VKRTSLHHGIGLMDVVELGGTGDIY 100
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 39.9 bits (89), Expect = 0.066
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 535 HHRVP-RETSRLLRHCAHQGL-HGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 708
H VP R + RH A Q H H R EQR R+G L GHP H +
Sbjct: 112 HDPVPQRRLAGRRRHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ- 170
Query: 709 TGQAHRSQGRRAVGLR 756
Q HR +G+RA G R
Sbjct: 171 -RQEHRQRGQRAGGQR 185
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -1
Query: 258 DEQFISLLN*DNIHKSSRISRVSPNFPFNLYEALFHNFQDFVSGQSILQTIPQENHQGQA 79
++Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + +
Sbjct: 48 NDQVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRK 107
Query: 78 LAQLV 64
+AQ +
Sbjct: 108 IAQFI 112
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 38.7 bits (86), Expect = 0.15
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 529 CGHHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 705
C HH R LLR + G H RH +R H RQ EGV R+GHP HH
Sbjct: 55 CAHHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL 112
Query: 706 GTGQAHRSQGRRAVG 750
Q H +G +G
Sbjct: 113 ---QHHEHEGIMKMG 124
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 38.3 bits (85), Expect = 0.20
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = -2
Query: 725 RCACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSW-RRCVPWSP*CAQCRRSRDVSR 549
RC P R CP R ARC CP R RC RC P RR R +
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAA 69
Query: 548 GTRWCP 531
R P
Sbjct: 70 ARRARP 75
Score = 33.9 bits (74), Expect = 4.4
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = -2
Query: 722 CACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQC-RRSRDVSRG 546
C P R CP R ARC CP R RC RC P A+C +
Sbjct: 7 CFARCPARCPARCPARCPARCPARCPARCPARCPA---RCPARCP--ARCPAHCPNNGAA 61
Query: 545 TRWCPHA 525
RW P A
Sbjct: 62 RRWRPAA 68
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 37.5 bits (83), Expect = 0.35
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 616 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRG 708
E Q+VH R+ G E +HL + HPPHHR+G
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKG 474
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 36.7 bits (81), Expect = 0.62
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAH 723
H HQG HG H H H+ QGH G H QGH HH Q H
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHHGHHQQQVH 59
Score = 36.3 bits (80), Expect = 0.82
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHPPHHRRGTGQAHRSQ 732
H HQG HG H H +Q+VH+ GH +H L QGH HH SQ
Sbjct: 41 HHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQGHHDHHGHHGQHSQ 94
>UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 928
Score = 36.7 bits (81), Expect = 0.62
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Frame = +1
Query: 607 LRHEVEQRVHNRQGHEGVHLAA--ARQGHPPHHRRGT-------GQAHRSQGRRAVGL 753
L H V +H+R G G H + AR PP HR+GT G++ R Q RRA+ L
Sbjct: 412 LLHRVLLELHDRNGSGGAHRQSSPARGETPPRHRQGTDAAVAAPGESERQQSRRAMRL 469
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 36.7 bits (81), Expect = 0.62
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 583 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRRA 744
H G+ H H +Q+ H+ GH H + G PHHR S GR++
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRKS 338
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 36.3 bits (80), Expect = 0.82
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
R+ DVKG I E AK +LCK++ T L G + D K DS
Sbjct: 95 RIQLDVKGNLVAIEIPAESAKTRLCKIRNKTTVKGGKVQLNFAFGANV-LADNTYKAKDS 153
Query: 435 IQLDIATT-----KIMDFIKFESGNLCMI 506
+ + + T +I+D + GN+ MI
Sbjct: 154 VVVTLGTDGEDRFRIVDHFPYAEGNVAMI 182
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 35.9 bits (79), Expect = 1.1
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -2
Query: 692 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWC 534
GGC C C CR R RRC PWSP CAQ C + RDV +G C
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARC 185
Query: 533 PHAPSYGL 510
P Y L
Sbjct: 186 ECRPGYRL 193
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 35.9 bits (79), Expect = 1.1
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 535 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV----HNRQGHEGVHLAAARQGHPPH-- 696
HHR +R RH H G R E+R+ H R H HL AAR H
Sbjct: 267 HHRPTATPARQHRHRPHVD-SGDRRRPPRERRLVLPRHGRTAHAD-HLPAARFPRQRHDV 324
Query: 697 --HRRGTGQAHRSQGRRA 744
HRR G+AH+ GRRA
Sbjct: 325 QPHRRLPGRAHQQCGRRA 342
Score = 33.9 bits (74), Expect = 4.4
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Frame = +1
Query: 532 GHHRVPRETSR---LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH-LAAARQG-HPPH 696
G R PR SR R +G G R +R H G G A R G HP
Sbjct: 92 GRGREPRRRSRGGTRRRGRGGRGGRGGTRRRPCRERSHRGAGRRGRRGTARGRHGAHPGR 151
Query: 697 HRRGTGQAHRSQGRRA 744
RR G+AHR RR+
Sbjct: 152 RRRHRGRAHRRHRRRS 167
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH-HRRGT--GQAHR 726
H H G H +H ++ VH Q H+ GVH A Q HP H H+RG QAH+
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRGVHPEQAHQ 445
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 574 HCAHQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAH 723
H H G HG H H H+ QGH G QGH HH Q H
Sbjct: 119 HQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVH 170
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRRAV 747
H HQG HG H H + GH G H GH HH H ++ V
Sbjct: 116 HHHHQGHHGHHGHHHHQ----GHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQV 169
Score = 33.1 bits (72), Expect = 7.6
Identities = 20/70 (28%), Positives = 24/70 (34%)
Frame = +1
Query: 523 GACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 702
G GHH H HG H H QGH+G H GH HH
Sbjct: 148 GHQGHHHHQGHHGHHGHHQQQVHHHGHHHIHPQAILYQTHQGHQGHHDHHGHHGHQGHHG 207
Query: 703 RGTGQAHRSQ 732
+ + Q + Q
Sbjct: 208 QHSQQHQQHQ 217
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +1
Query: 565 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRRA 744
+ H H+ HGT HE E R H+ HE +H GHP H G A + RR
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAAPLEARR- 52
Query: 745 VGLR 756
GLR
Sbjct: 53 -GLR 55
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +1
Query: 52 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVRTDPTYPAGFMDVVS 231
+T P +L + + L + ++ K L E L I KQ+ +KVE K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 232 IEKTNEL 252
IE +++
Sbjct: 158 IEDMDQV 164
>UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr0146 protein - Bradyrhizobium
japonicum
Length = 530
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +1
Query: 586 QGLHGTHLRHEVEQRVHNRQGH----EGVHLAAARQGHPPHHRRGTGQAHRSQGRRA 744
+G+HG H + RV +RQG +G+ AA RQ P H RGT + R + + A
Sbjct: 371 EGVHGRHHHQRLPGRVRHRQGRPVAVQGL-CAAFRQRRLPLHLRGTAEVDRERAQCA 426
>UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 597
Score = 35.1 bits (77), Expect = 1.9
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +1
Query: 544 VPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAH 723
VPR+ SR L A + G + H+V+ R G EG A A G P HR G QA
Sbjct: 527 VPRQASRHLHEAA--AVPGDQVLHQVDAFAE-RHGGEGA--ADADDGRPDQHRMGVRQAE 581
Query: 724 RSQGRRA 744
+ G A
Sbjct: 582 QRLGASA 588
>UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox
protein araucan; n=1; Apis mellifera|Rep: PREDICTED:
similar to Homeobox protein araucan - Apis mellifera
Length = 677
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 601 THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQ 732
TH H+ +H+ Q H G +Q H HH G H SQ
Sbjct: 429 THPHHQQYHHLHHHQQHYGQQQQQQQQQHQHHHMPSQGHHHHSQ 472
>UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens
"Keratin-associated protein 10-4; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens
"Keratin-associated protein 10-4 - Takifugu rubripes
Length = 353
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -2
Query: 722 CACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 573
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 149 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 199
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -2
Query: 722 CACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 573
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 275 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 325
Score = 33.1 bits (72), Expect = 7.6
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -2
Query: 749 PTARRPWLRCACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCR 570
PT R C CP R C C RC SC C C T + RC + CR
Sbjct: 152 PTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSCRCPTSCWCPT-YCRCPTYCRCPTSCR 210
Query: 569 RSRDVSRGTR-WCP 531
T WCP
Sbjct: 211 CPTSCWCPTYCWCP 224
Score = 33.1 bits (72), Expect = 7.6
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = -2
Query: 749 PTARRPWLRCACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQ 576
PT+ R C CP R C C + C C C RC TS RC W P
Sbjct: 164 PTSCRCPTSCWCPTYCRCPTSCRCPTSCWCPTYCRCPTYCRCPTSC-RCPTSCWCPTYCW 222
Query: 575 CRRSRDVSRGTRWCP 531
C S WCP
Sbjct: 223 CPTSCWCPTYC-WCP 236
>UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 711
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 616 EVEQRVHNRQGHEGVHLAAARQGH--PPHH-RRGTGQAHRSQGRRAVG 750
E EQR + +GH+ R+ H P HH G G+ HR++ R AVG
Sbjct: 236 EQEQRFEHDEGHDDRRRDQRREAHDLPQHHVGHGGGEQHRARHRDAVG 283
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +1
Query: 532 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGT 711
G R R H H H H RH ++ H+R H+ R GH H R
Sbjct: 509 GRRRRDRHRRDHRHHDRHHRDHRHHDRHHRDRHRHDRHRHDRRLHDRHRHGHHRHGHRLR 568
Query: 712 GQAHRSQGRRAVGL 753
G H + R GL
Sbjct: 569 GHRHHDRRPRGHGL 582
Score = 33.5 bits (73), Expect = 5.8
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 535 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAAR-QGHPPHHRRGT 711
HHR R R H H+ H H RH ++R+H+R H G H R +GH H RR
Sbjct: 526 HHRDHRHHDR---H--HRDRH-RHDRHRHDRRLHDRHRH-GHHRHGHRLRGHRHHDRRPR 578
Query: 712 GQAHRSQGRR 741
G RR
Sbjct: 579 GHGLHRHDRR 588
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 583 HQGLHGTHLRHEVEQRVHNRQGHEGV---HLAAARQGHPPHHRR-GTGQAHRSQGRRAVG 750
HQ R V +R GH+G H+AA G P HHRR G + R+ GRR VG
Sbjct: 1828 HQPERQRARRRRVGLGARHRHGHDGAARRHVAALPPG-PRHHRRDGQPRRPRAGGRRRVG 1886
Score = 33.5 bits (73), Expect = 5.8
Identities = 23/68 (33%), Positives = 26/68 (38%)
Frame = +1
Query: 538 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQ 717
HR R R LR A G RH +R +R+ H G L A G P RRG
Sbjct: 2988 HRRRRGGDRELRRLARLLAEGRRHRHRA-RRHRDREDHRGAGLGARSGGRPDGARRGRRH 3046
Query: 718 AHRSQGRR 741
RR
Sbjct: 3047 PRAGDERR 3054
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 535 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHHRR 705
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTH 182
Query: 706 GTGQAHRSQ 732
Q + Q
Sbjct: 183 QQQQQQQQQ 191
>UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 648
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 610 RHEVEQRVHNRQGHEGVHLAAARQ-GHPPHHRRGTGQAHRSQGRR 741
R E E+R ++ G + +R+ GH HHR G+G+ HR RR
Sbjct: 60 RREKERRKREKRRMAGRSRSGSRERGHRRHHRGGSGERHRDGRRR 104
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.9 bits (74), Expect = 4.4
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 372 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITEAV 518
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++ +
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIVVSRI 755
>UniRef50_UPI000051A4EF Cluster: PREDICTED: similar to murashka
CG9381-PA, isoform A isoform 1; n=1; Apis mellifera|Rep:
PREDICTED: similar to murashka CG9381-PA, isoform A
isoform 1 - Apis mellifera
Length = 679
Score = 33.9 bits (74), Expect = 4.4
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 583 HQGLHGTH-LRHEVEQRVHN-RQGHEGVHLAAARQGHPPHHRRGTGQAHRSQG 735
H HG H H + HN H +H A Q H PHH GTG H +QG
Sbjct: 283 HNSHHGIHSSHHNIHNSHHNLHNSHHNIH--NAHQTH-PHHPPGTGH-HPAQG 331
>UniRef50_Q3JNJ8 Cluster: Putative uncharacterized protein; n=10;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 1311
Score = 33.9 bits (74), Expect = 4.4
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = +1
Query: 505 SRRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG 684
+RR +G G HR R + LR H G H+R VE R R GV R+
Sbjct: 1132 ARRERVGG-GRHRHVRRLAPALRAADHAGRQRGHVRRAVEPRA-ARALERGVERLLRRR- 1188
Query: 685 HPPHHRRGTGQAHRSQGRRA 744
R GQAH ++G RA
Sbjct: 1189 -----TRRIGQAHHARGERA 1203
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 538 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQ 717
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEHEHEHDEH 373
Query: 718 AH 723
H
Sbjct: 374 EH 375
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGTGQAHRSQG 735
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 565 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 705
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein
P0419B01.9; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0419B01.9 - Oryza sativa subsp. japonica (Rice)
Length = 123
Score = 33.5 bits (73), Expect = 5.8
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Frame = -2
Query: 683 PC-RAAARCTPSC---PCRL*TR-------CSTSWRRCV-PWSP*CAQ--CRRSRDVSRG 546
PC RAAA C P C PCR R C + CV P SP CA CRR R R
Sbjct: 41 PCVRAAAPCVPPCTSRPCRRPRRHLRPPSACVRAAALCVPPSSPPCASRPCRRPRHRLRP 100
Query: 545 TRWCPHA 525
C HA
Sbjct: 101 PAACVHA 107
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVE-QRVHNRQGHEGVHLAAARQGHPPHHRR 705
H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 128 HLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmodium
chabaudi|Rep: Pc-fam-3 protein putative - Plasmodium
chabaudi
Length = 160
Score = 33.5 bits (73), Expect = 5.8
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARQGHPPHHRRGTGQAH 723
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 73 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHEH 124
Score = 33.1 bits (72), Expect = 7.6
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 574 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARQGHPPHHRRGTGQAH 723
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 97 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHHH 148
>UniRef50_A7SGQ8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 172
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 595 HGTHLRH--EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRRAVGLR 756
H T ++H +++ HNR H A H H+R TG H + R A ++
Sbjct: 7 HATDIQHATDIQHATHNRHATGNQH--ATDNQHATHNRHATGNQHATDNRHATDIQ 60
>UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;
n=1; Neurospora crassa|Rep: Related to merozoite surface
antigen 2 - Neurospora crassa
Length = 388
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 507 TEAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSP 614
T VT G+ P A P+P+T T+ P DTP P
Sbjct: 288 TNEVTDGLRKPDASAEQQPSPTTATTTTPPTDTPKP 323
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 33.5 bits (73), Expect = 5.8
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 535 HHRV-PRETSRLLRHCAHQGLHGTH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 705
HH + P + + L H HQ LH TH L H + Q + Q H +H PHH R
Sbjct: 95 HHTLQPPQVTVQLHHHIHQHLHHTHQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4487,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 258
Score = 33.1 bits (72), Expect = 7.6
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 571 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGTGQAHRSQGRRA 744
R H G HL E R G G A RQ PPH RR G+ RSQG R
Sbjct: 152 RRLEHGGGPRLHLE-PAESEAAARTGRGGDRRARGRQRAQLPPHTRRPAGRYRRSQGWRH 210
Query: 745 VG 750
+G
Sbjct: 211 LG 212
>UniRef50_Q6AQX9 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 3413
Score = 33.1 bits (72), Expect = 7.6
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -3
Query: 745 LRGDLGCDALVPF-LGDGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVE 569
+ + +AL P DG+ D L V L A + ++ GEGV+ G V
Sbjct: 2830 ITNSVSLEALAPIAFADGDGD-LEPYLTKV-LNAFDLKQTLLDTVGEGVAHGDASVLMAS 2887
Query: 568 GAGMSLAGHDGAHTPQVTASVIIHKF-PDSNLMKSI 464
G G + G DG H + +HK+ P + + +SI
Sbjct: 2888 GDGGIVLGADGGHIQSILVDGTLHKYVPVTKVTESI 2923
>UniRef50_Q3JRY2 Cluster: Pristinamycin I synthase 3 and 4; n=2;
Burkholderia|Rep: Pristinamycin I synthase 3 and 4 -
Burkholderia pseudomallei (strain 1710b)
Length = 551
Score = 33.1 bits (72), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 677 RAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQC-RRSRDVSRGTRWCPHAPSYGLR 507
R AAR + +C RC SWR + S +C R +R R + C PS+G R
Sbjct: 452 RRAARSSAACARAWPHRCRLSWRTGISRSSMRCRCPRTARPTRRRSSRCTGRPSFGAR 509
>UniRef50_A0VKY2 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 399
Score = 33.1 bits (72), Expect = 7.6
Identities = 35/99 (35%), Positives = 38/99 (38%), Gaps = 18/99 (18%)
Frame = -2
Query: 749 PTARRPWLRCACPVPR-RW*GGCPCRAAARCT-----PSCPCRL*TR--CSTSWR----- 609
PTARR W R C +P RW R RC P CP R R C WR
Sbjct: 301 PTARRGWARPRCRLPSGRWSSARWRRRPRRCPRRRTGPRCPWRPSRRAACRAPWRAGCRS 360
Query: 608 ----RCVPWSP*CAQCRRSRDVSRGTRWC-PHAPSYGLR 507
PW+P A S D G W P PS G+R
Sbjct: 361 ATGSHLRPWAP--AAGAPSADARPG--WSGPRRPSAGVR 395
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 583 HQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHR 726
HQG+HG + H ++ + + H+G+H + GH H+ G G H+
Sbjct: 154 HQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQ 203
>UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene
product-related; n=8; Eukaryota|Rep: Drosophila
melanogaster CG8797 gene product-related - Plasmodium
yoelii yoelii
Length = 2198
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 586 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRR 741
QG G H++H+ E ++QGH +QG ++G GQ + QG++
Sbjct: 1207 QGQQGAHVQHQQEAHRQHQQGHGQQQGQGQQQGQ--GQQQGQGQGQQGQGQQ 1256
>UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Cysteinyl-tRNA
synthetase - Mimivirus
Length = 509
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +1
Query: 13 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVR 189
+LDKLG +Y S+ HK+++ + ++I R++L+ ++ +K++L + + R
Sbjct: 421 LLDKLGFIYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSPGIKKQLFDILDRQR 479
>UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor;
n=2; Plasmodium lophurae|Rep: Histidine-rich
glycoprotein precursor - Plasmodium lophurae
Length = 351
Score = 33.1 bits (72), Expect = 7.6
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 535 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTG 714
HH P E H H H H E + H H H HPPHH G
Sbjct: 62 HHHHPEE-----HHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLG 116
Query: 715 QAH 723
H
Sbjct: 117 HHH 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,331,800
Number of Sequences: 1657284
Number of extensions: 19226824
Number of successful extensions: 67908
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 62822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67649
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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