Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00403
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 136 2e-32
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 135 4e-32
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 135 4e-32
04_04_0040 + 22322839-22324173 31 0.75
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.99
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 31 0.99
05_03_0323 - 12424243-12424776 31 0.99
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.3
12_02_0735 - 22636835-22639502,22639755-22640734 29 3.0
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 4.0
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 29 5.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.3
12_02_0759 - 22882435-22882731 28 7.0
12_01_1065 + 10983528-10983992,10985240-10985293 28 7.0
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 28 7.0
07_01_0645 - 4807411-4807613,4808214-4808691 28 7.0
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 7.0
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 9.2
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 28 9.2
01_06_0405 + 29103723-29103839,29103928-29104012,29104572-291046... 28 9.2
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 136 bits (329), Expect = 2e-32
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
P WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + V+G
Sbjct: 31 PSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDG 90
Query: 181 KVRTDPTYPAGFMDVVSIEKTNELF 255
KVRTD TYPAGFMDVVSI KT E F
Sbjct: 91 KVRTDKTYPAGFMDVVSIAKTGENF 115
Score = 124 bits (300), Expect = 6e-29
Identities = 53/85 (62%), Positives = 69/85 (81%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRTIRYPDPLIK ND+
Sbjct: 116 RLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDT 175
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
I++D+ T KI+DFIKF+ GN+ M+T
Sbjct: 176 IKIDLETNKIVDFIKFDVGNIVMVT 200
Score = 103 bits (247), Expect = 2e-22
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +2
Query: 485 VWELVYDHGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 664
V +V GGRN GRVG I SRE+H GSF+ +H++D+ GH FATR+ NVF IGK K ++
Sbjct: 193 VGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWV 252
Query: 665 SLPRGKGIRLTIAEERDKRIAAKVA 739
SLP+GKGI+L+I EE KR A A
Sbjct: 253 SLPKGKGIKLSIIEEARKRNAEAAA 277
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 135 bits (326), Expect = 4e-32
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+ QR + V+G
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNE 249
KVRTD TYPAGFMDV+SI KT E
Sbjct: 75 KVRTDKTYPAGFMDVISIPKTGE 97
Score = 122 bits (293), Expect = 4e-28
Identities = 51/85 (60%), Positives = 68/85 (80%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+
Sbjct: 100 RLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDT 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
I++D+ T KI+DFIKF+ GN+ M+T
Sbjct: 160 IKIDLETNKIVDFIKFDVGNVVMVT 184
Score = 109 bits (263), Expect = 2e-24
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +2
Query: 485 VWELVYDHGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 664
V +V GGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++
Sbjct: 177 VGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWV 236
Query: 665 SLPRGKGIRLTIAEERDKRIAAKVAA 742
SLP+GKGI+L+I EE+ KR AA AA
Sbjct: 237 SLPKGKGIKLSIIEEQRKRDAAAQAA 262
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 135 bits (326), Expect = 4e-32
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +1
Query: 1 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEG 180
PK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+ QR + V+G
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDG 74
Query: 181 KVRTDPTYPAGFMDVVSIEKTNE 249
KVRTD TYPAGFMDV+SI KT E
Sbjct: 75 KVRTDKTYPAGFMDVISIPKTGE 97
Score = 122 bits (295), Expect = 2e-28
Identities = 52/85 (61%), Positives = 68/85 (80%)
Frame = +3
Query: 255 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 434
RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+
Sbjct: 100 RLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDT 159
Query: 435 IQLDIATTKIMDFIKFESGNLCMIT 509
I++D+ T KI+DFIKF+ GN+ M+T
Sbjct: 160 IKIDLETNKIVDFIKFDVGNVVMVT 184
Score = 110 bits (264), Expect = 1e-24
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +2
Query: 485 VWELVYDHGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 664
V +V GGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++
Sbjct: 177 VGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWV 236
Query: 665 SLPRGKGIRLTIAEERDKRIAAKVAA 742
SLP+GKGI+L+I EE+ KR AA AA
Sbjct: 237 SLPKGKGIKLSIIEEQRKRDAAAQAA 262
>04_04_0040 + 22322839-22324173
Length = 444
Score = 31.5 bits (68), Expect = 0.75
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 556 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTG 714
TSRL LR H H HG + RH++ +R R H L A G P + G
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 103 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 2
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 31.1 bits (67), Expect = 0.99
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 547 PRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRGTGQA 720
P +RL RH G HG R + E + GH H G P HH RG GQA
Sbjct: 15 PEAHARLPRHAPPAGGHGRGGRGQ-EGPIAIAAGHGRGHRGGGHGGPASPRHHLRGRGQA 73
>05_03_0323 - 12424243-12424776
Length = 177
Score = 31.1 bits (67), Expect = 0.99
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 748 LLRGDLGCDALVPFLGDG-EADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNV 572
LLR + D++ L D + +A A QR+ + R H ++P G G G N
Sbjct: 83 LLRPHVEDDSVHGSLHDETDGEATAREQREAQQRHNIAAAHAMRPHGRGRGNG----GNG 138
Query: 571 EGAGMSLAGHD-GAHTPQVTASVII 500
G G + GH GAH V A ++
Sbjct: 139 RGRGSAGRGHAIGAHEDDVDADFVL 163
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 636 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 514
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 648 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 553
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 648 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 553
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/64 (25%), Positives = 24/64 (37%)
Frame = +1
Query: 538 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGTGQ 717
H R + H H G H H +H E +L +++ GH P+ R Q
Sbjct: 313 HMYVRPSPNQDEHHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQ 372
Query: 718 AHRS 729
H +
Sbjct: 373 YHEA 376
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 534 APSCPARDI--PAPSTLCTSRTPRDTPSP 614
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>12_02_0759 - 22882435-22882731
Length = 98
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 601 THLRHEVEQRVHNRQGHEGVH-LAAARQGHPPHHRRGTGQAHRSQG 735
TH RH + +R R+G G L A R P H G G+ R +G
Sbjct: 42 THERHHLVERGQRRRGDRGAGVLGADRVEEGPQH--GGGERRRGRG 85
>12_01_1065 + 10983528-10983992,10985240-10985293
Length = 172
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 634 HNRQGHEGVHLAAARQGHPPHHRRGTGQAHRSQGRRAVGL 753
H ++ A HH + T +HRS G AVGL
Sbjct: 57 HTSSATSSLNAAGDNSADRVHHTQDTPVSHRSAGNHAVGL 96
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 3 QSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 164
QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 895 QSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>07_01_0645 - 4807411-4807613,4808214-4808691
Length = 226
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 398 PLPRPTYQSQRFHPVRHRNY-EDYGLHQV*VWELVYD-HGGRNLGRV 532
P P PT +RFH V N + G ++ + +L YD GGRNL V
Sbjct: 27 PPPSPTPWPERFHAVLFTNLTQTSGGGKLQMTDLYYDWPGGRNLNLV 73
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 670 AARQGHPPHHRRGTG 714
AAR+GHPP H G G
Sbjct: 4 AARRGHPPPHENGVG 18
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 611 RRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 516
+RC+P S A +CR+SR S+ W P+ S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 TGPHKL-RECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVEGKVRTDPTYPAGFMDVVS 231
TGP+KL R C I + L LTG+ + + ++++G DP G V++
Sbjct: 365 TGPYKLVRRCEVTAILILYGLPRLLTGSILAHEMMHAYLRLKGYQTLDPKVEEGICQVLA 424
>01_06_0405 +
29103723-29103839,29103928-29104012,29104572-29104674,
29104798-29104882,29105414-29105497,29105627-29105730,
29106522-29106783,29106978-29107414,29107637-29107718,
29109913-29110089,29110640-29110732,29110812-29110877,
29110992-29111038,29111165-29111430,29111443-29111845,
29111992-29112376
Length = 931
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -2
Query: 722 CACPVPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP--*CAQCRRSRD 558
C PVP C + TP +RC+ S R C P CA C R+ D
Sbjct: 820 CNAPVPFESADVAMCSGSNPATPPAEAHKLSRCTASMRLCPVLQPTWHCACCGRTVD 876
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,317,805
Number of Sequences: 37544
Number of extensions: 581043
Number of successful extensions: 2080
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2077
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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