Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00397
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 152 5e-38
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 151 1e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 134 1e-32
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 105 5e-24
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 93 4e-20
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 32 0.11
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 31 0.19
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.0
SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 28 1.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 28 1.8
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.1
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.0
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 27 4.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 4.0
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 5.4
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 5.4
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 7.1
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.1
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 7.1
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 9.4
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 9.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.4
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 9.4
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.4
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 152 bits (369), Expect = 5e-38
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +1
Query: 256 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKE 435
LIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K
Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKT 496
Query: 436 NKITITNDKGRLSKEEIERMVNEA 507
KITITNDKGRLSKEEI+RMV+EA
Sbjct: 497 QKITITNDKGRLSKEEIDRMVSEA 520
Score = 98.7 bits (235), Expect = 8e-22
Identities = 43/86 (50%), Positives = 62/86 (72%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDS 689
KY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD
Sbjct: 522 KYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDH 581
Query: 690 NQLADKEEYEHKQKELEGIYNPIIRR 767
N A K+EYE KQKELEG+ NPI+ +
Sbjct: 582 NTTAAKDEYEDKQKELEGVANPIMAK 607
Score = 73.3 bits (172), Expect = 4e-14
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
FNGKE KSINPDE IL GD SE+ QD GIETAGGVMT L
Sbjct: 352 FNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPL 411
Query: 182 IKRNXXXXXXXXXXXXXYSDNQPG 253
IKRN Y+DNQPG
Sbjct: 412 IKRNTTIPTKKSEVFSTYADNQPG 435
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 151 bits (366), Expect = 1e-37
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +1
Query: 256 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKE 435
LIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K
Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKT 496
Query: 436 NKITITNDKGRLSKEEIERMVNEA 507
KITITNDKGRLSKEEI+RMV EA
Sbjct: 497 QKITITNDKGRLSKEEIDRMVAEA 520
Score = 97.5 bits (232), Expect = 2e-21
Identities = 42/86 (48%), Positives = 63/86 (73%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDS 689
KY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDS
Sbjct: 522 KYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDS 581
Query: 690 NQLADKEEYEHKQKELEGIYNPIIRR 767
N A K+E+E KQKELE + NPI+ +
Sbjct: 582 NTTAAKDEFEAKQKELESVANPIMAK 607
Score = 74.5 bits (175), Expect = 2e-14
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
FNGKE KSINPDE +L GD SE+ QD GIETAGGVMT L
Sbjct: 352 FNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPL 411
Query: 182 IKRNXXXXXXXXXXXXXYSDNQPG 253
IKRN YSDNQPG
Sbjct: 412 IKRNTTIPTKKSEIFSTYSDNQPG 435
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 134 bits (325), Expect = 1e-32
Identities = 63/85 (74%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNK 432
LIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K
Sbjct: 466 LIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGK 525
Query: 433 ENKITITNDKGRLSKEEIERMVNEA 507
K+ I NDKGRLS+E+IERMV EA
Sbjct: 526 PEKLVIKNDKGRLSEEDIERMVKEA 550
Score = 69.7 bits (163), Expect = 4e-13
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD 686
++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD D +WL+
Sbjct: 552 EFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLE 611
Query: 687 -SNQLADKEEYEHKQKELEGIYNPIIRR 767
+ A KEE+E ++++L+ + +PI ++
Sbjct: 612 IHGEDASKEEFEDQRQKLDAVVHPITQK 639
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
F GK+ +K INPDE +L G++ + + GIET GGVMT L
Sbjct: 383 FFGKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKL 440
Query: 182 IKRN 193
I RN
Sbjct: 441 IGRN 444
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 105 bits (253), Expect = 5e-24
Identities = 48/83 (57%), Positives = 66/83 (79%)
Frame = +1
Query: 259 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKEN 438
I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++
Sbjct: 481 IRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDS 540
Query: 439 KITITNDKGRLSKEEIERMVNEA 507
IT+ G L+ EIE MV +A
Sbjct: 541 SITVAGSSG-LTDSEIEAMVADA 562
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +2
Query: 11 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 190
+E KS+NPDE +L G V+D GIET GGV T LI R
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457
Query: 191 N 193
N
Sbjct: 458 N 458
Score = 30.7 bits (66), Expect = 0.25
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTILDKCNDTIKWL 683
KYR D +KE I+ N ES C ++S ++ +KL ++ + + I D K
Sbjct: 564 KYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDLRETVAKVN 623
Query: 684 DSNQLADKEEYEHKQKELE 740
++ E+ + K E++
Sbjct: 624 AGDEGITSEDMKKKIDEIQ 642
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 93.1 bits (221), Expect = 4e-20
Identities = 41/81 (50%), Positives = 57/81 (70%)
Frame = +1
Query: 265 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKI 444
V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I
Sbjct: 445 VYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHI 504
Query: 445 TITNDKGRLSKEEIERMVNEA 507
ITN G LS +I+ M+ A
Sbjct: 505 EITNSVGHLSSTKIQEMIENA 525
Score = 35.1 bits (77), Expect = 0.012
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 178
F+G+ LNKSINPDE +L + S++ QD G+ G V
Sbjct: 356 FDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGV 415
Query: 179 LIKRNXXXXXXXXXXXXXYSDNQ 247
+ RN +DNQ
Sbjct: 416 VCPRNTPIPTIKKRTFTTVADNQ 438
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 31.9 bits (69), Expect = 0.11
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +1
Query: 367 VTFDIDANGILNVSA---IEKSTNKENKITITNDKGR---LSKEEIERMVNEAGSTETRM 528
VT + D + LN + +E K+N I N + LSKEE R + + R+
Sbjct: 49 VTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRL 108
Query: 529 TSKRRPSRPRMHWNLTASA 585
T RRP HW+ T +A
Sbjct: 109 TIPRRP-----HWDQTTTA 122
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 382 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAGSTETRMTSKRR 543
D LNVS + S +E +T ++ R+ +EE +RM ++ T ++R
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKR 111
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 31.1 bits (67), Expect = 0.19
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 ETIQAKNALESYCFSMKSTMED--EKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKE 710
ET+ KNALE Y + ++ ++D + S + +L K D WL + + K
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKA 631
Query: 711 EYEHKQKELEGIYNPIIRR 767
Y K ++L + PI +R
Sbjct: 632 VYTAKLEDLMRVGGPIRQR 650
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 615 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 740
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 487 ERMVNEAGSTETRMTSKRRPSR 552
+R+ NE S E TSK+RPSR
Sbjct: 200 KRLKNEKSSAEISQTSKQRPSR 221
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 1.8
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
Frame = +3
Query: 429 QGEQDHHYQRQRSSLQGRDRAYG**GR-------KYRNE-------DDKQKETIQAKNAL 566
+ E + +++++ + DR GR KYRN+ DDKQ + KN+L
Sbjct: 1235 KAENEERFEKEKRRIMSEDRDKLIRGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSL 1294
Query: 567 ESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGI 746
E+ M+ + E K D ++ LDK D K + +K+ Y EL
Sbjct: 1295 ETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK---PDYAEEKDPYITVMSELRSR 1350
Query: 747 YNPIIRRCTRV 779
+ +R V
Sbjct: 1351 IQNVPKRTVTV 1361
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 390 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAYG**GRKYRNEDDKQKE 542
R P R +YRE H + + H R QGR +Y R +R++ ++E
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYK--KRSHRSDRYTERE 369
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 407 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 270
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 522 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 683
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 582 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPII 761
S+ S+ KL D K + L C ++ K DSNQ+ + E K+K+ + II
Sbjct: 188 SLVSSNTASKLHLGRKDIVKLSELRNCINSSK--DSNQIQELENLLRKEKQRNTEHEKII 245
Query: 762 RRCTRVPEE 788
RR + +E
Sbjct: 246 RRMKKELKE 254
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +3
Query: 522 EDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN-- 692
E K+ ET++ KN+ + + ++ E LK +K ++++ IK + N
Sbjct: 503 EVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVS 562
Query: 693 QLADK-EEYEHKQKELEGIYNPII 761
+L +EY +K K+ E YN ++
Sbjct: 563 ELNGTIDEYRNKLKDKEETYNEVM 586
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 406 SAIEKSTNKEN---KITITNDKGRLSKEEIERMVNEAGSTETRMTSKRRPSRPRMHWNLT 576
SA+EK K K+TIT+D ++S + G + T + SK S + N
Sbjct: 41 SALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKV 100
Query: 577 ASA 585
+SA
Sbjct: 101 SSA 103
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 507 RKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI--LDKCNDTIK- 677
R+ E +++ET + KN + ++ ++ + KEK + K+T ++ N T
Sbjct: 212 REVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKTKPI 271
Query: 678 WLDSNQLADKEEYEHKQKEL 737
W + KEEY K L
Sbjct: 272 WTRNPSEVTKEEYASFYKSL 291
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 7.1
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +3
Query: 522 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQL 698
++ K + KNA ++ M DE+ E S K+ K +D + LD +
Sbjct: 112 KNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDI 171
Query: 699 ADKE-EYEHKQKELEGIYNPIIRRCTRVPEE 788
E + + K+K E P R TR EE
Sbjct: 172 ESSEKDKKKKKKSKENDDAPKKDRKTRKKEE 202
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 525 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 701
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 702 DK 707
DK
Sbjct: 238 DK 239
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 516 RNEDDKQKETIQAKNALESYCFSMKST 596
RN+ +KQ TI KNA++ Y S+K T
Sbjct: 255 RNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 427 NKENKITITNDKGRLSKEEIERMVNE 504
NK+ K T D SKEE+E +V E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVRE 554
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 9.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 549 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 728
+A+ A + +E EK KEK D D++ DT+ D NQ+ +E E Q
Sbjct: 254 KAREARRRRSAQNSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQ 302
Query: 729 KELE 740
KE++
Sbjct: 303 KEVD 306
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 555 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 680
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 519 NEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 695
NE + Q + ++ K N + + E+ +K + + D L+ + + L N
Sbjct: 590 NELNSQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNL 649
Query: 696 LADKEEYEHKQKELEGIYNPI 758
YEH QK + ++N +
Sbjct: 650 EDSTARYEHLQKSFKNVFNQL 670
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 409 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAGSTETRMTSKR 540
AIE+ N+E ++ + ++ R EEI+ ++ S+ T +T++R
Sbjct: 520 AIERRRNEEEELARSRERARKKAEEIKISSSKMNSSPT-ITNER 562
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,927,051
Number of Sequences: 5004
Number of extensions: 55853
Number of successful extensions: 263
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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