Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00395
         (336 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124516-1|BAC85871.1|  567|Homo sapiens protein ( Homo sapiens ...    31   0.67 
BC037288-1|AAH37288.1| 1307|Homo sapiens FAM135B protein protein.      29   2.7  
AB196635-1|BAE53437.1| 1141|Homo sapiens C8orfK32 protein protein.     29   2.7  
AK160377-1|BAD18720.1|  659|Homo sapiens FLJ00322 protein protein.     29   3.6  

>AK124516-1|BAC85871.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42525 fis, clone BRACE3001391, highly  similar
           to Polycystin precursor. ).
          Length = 567

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 18/43 (41%), Positives = 18/43 (41%)
 Frame = +1

Query: 118 RPTCCTRCSSCFWSTPCSRXLVCPGTR*VEHNCRRTSRRHRSA 246
           RPT  T CSS FW TP    L    T        R   RHR A
Sbjct: 21  RPTSVTWCSSSFWWTPIPFPLAISATTPSPPRWPRWRSRHRPA 63


>BC037288-1|AAH37288.1| 1307|Homo sapiens FAM135B protein protein.
          Length = 1307

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 142 SSCFWSTPCSRXLVCPGTR*VEHNCRRTSRRHRSALVGGSAQ 267
           SS  WS   SR L  P  R V H   R    HR++L GG  +
Sbjct: 594 SSVAWSEARSRALELPSDREVLHPFVRRHALHRNSLEGGHTE 635


>AB196635-1|BAE53437.1| 1141|Homo sapiens C8orfK32 protein protein.
          Length = 1141

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 142 SSCFWSTPCSRXLVCPGTR*VEHNCRRTSRRHRSALVGGSAQ 267
           SS  WS   SR L  P  R V H   R    HR++L GG  +
Sbjct: 693 SSVAWSEARSRALELPSDREVLHPFVRRHALHRNSLEGGHTE 734


>AK160377-1|BAD18720.1|  659|Homo sapiens FLJ00322 protein protein.
          Length = 659

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/43 (39%), Positives = 17/43 (39%)
 Frame = +1

Query: 118 RPTCCTRCSSCFWSTPCSRXLVCPGTR*VEHNCRRTSRRHRSA 246
           RPT    CSS FW TP    L    T        R   RHR A
Sbjct: 42  RPTSVMWCSSSFWWTPIPFPLAISATTPSPPRWPRWRSRHRPA 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,870,162
Number of Sequences: 237096
Number of extensions: 524941
Number of successful extensions: 1193
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)