Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00395
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 0.63
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 29 1.1
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 27 3.3
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 26 5.8
L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid desa... 26 5.8
AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical ... 26 5.8
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 26 5.8
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 26 7.7
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 26 7.7
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 26 7.7
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 26 7.7
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 26 7.7
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 26 7.7
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 0.63
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 127 CCTRCSSCFWSTPCSRXLVCP 189
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 97 HWLQCFIPVFMDRSNYFWFSWYHSLFLGLLFI 2
H +QC I + M + F W+ LF+GLL +
Sbjct: 268 HSIQCVIVINMLAEKVYVFFWFWLLFVGLLTV 299
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 27.1 bits (57), Expect = 3.3
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 94 WLQCFIPVFMDRSNYFWFSWYHS 26
WL CF + F+ +W+HS
Sbjct: 302 WLNCFSEMMQFADRQFYLNWWHS 324
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 176 LLEQGVLQKQELQRVQQVGRYLQP--MKPLAPVF 81
L+EQ ++ +++L+R R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid
desaturase protein.
Length = 402
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 58 SNYFWFSWYHSLFLGLLFI 2
SN+FW+ W F GL+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLV 275
>AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical
protein Y67H2A.8 protein.
Length = 402
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 58 SNYFWFSWYHSLFLGLLFI 2
SN+FW+ W F GL+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLV 275
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 176 LLEQGVLQKQELQRVQQVGRYLQP--MKPLAPVF 81
L+EQ ++ +++L+R R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 127 CCTRCSSCFWSTPCSRXLVC 186
CC RC +C + C+R C
Sbjct: 96 CCRRCCTCCRTCCCTRCCTC 115
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 115 YRPTCCTRCSSCFWSTPCSRXLVC 186
YR C CS CF+S S C
Sbjct: 240 YRSVCPKSCSQCFYSNSTSSYECC 263
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 127 CCTRCSSCFWSTPCSRXLVC 186
CC RC +C + C+R C
Sbjct: 94 CCRRCCTCCRTCCCTRCCTC 113
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 115 YRPTCCTRCSSCFWSTPCSRXLVC 186
YR C CS CF+S S C
Sbjct: 240 YRSVCPKSCSQCFYSNSTSSYECC 263
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 127 CCTRCSSCFWSTPCSRXLVC 186
CC RC +C + C+R C
Sbjct: 95 CCRRCCTCCRTCCCTRCCTC 114
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 127 CCTRCSSCFWSTPCSRXLVC 186
CC RC +C + C+R C
Sbjct: 95 CCRRCCTCCRTCCCTRCCTC 114
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 127 CCTRCSSCFWSTPCSRXLVC 186
CC RC +C + C+R C
Sbjct: 96 CCRRCCTCCRTCCCTRCCTC 115
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 118 RPTCCTRCSSCFWSTPCSRXLVCPGTR*VEHNCRRTSRRHRSALVGGSAQ 267
R CCTRC +C C C G H + T+ L+ A+
Sbjct: 105 RTCCCTRCCTCCRPCCCGCGCGCCGCGGGGHFLKSTAMARPKPLIEEKAK 154
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 115 YRPTCCTRCSSCFWSTPCSRXLVC 186
YR C CS CF+S S C
Sbjct: 291 YRSVCPKSCSQCFYSNSTSSYECC 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,613,023
Number of Sequences: 27780
Number of extensions: 75089
Number of successful extensions: 243
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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