Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00394
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.71
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 3.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 3.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 3.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 3.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 3.8
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 3.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 3.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 3.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 5.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.0
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 25.0 bits (52), Expect = 0.71
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -2
Query: 633 ISYAVFSILNITLLSSQREMSCQLTWWL 550
++ +VF+++ LL +EMS ++ +W+
Sbjct: 323 LALSVFALILTALLRKMQEMSIEVPYWI 350
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 436 SMSWNSLGK*SSTMSLWPSCHSLY 365
++S NSLG S + SCHS Y
Sbjct: 211 AISSNSLGSRSRSFQRTSSCHSRY 234
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 45 REQKSYKN-EREYREYRETSRERSRDRRE 72
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 589 RQQRDIQDTEHRIRDVLETGRERGQLRRQ 675
R+Q+ ++ E R+ ET RER + RR+
Sbjct: 294 REQKSYKN-EREYREYRETSRERSRDRRE 321
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 554 GWCSLFRLPRSGGRCIANVSIQFESL 477
GW +L R GGR + +S+ SL
Sbjct: 2 GWVALGRCAGGGGRLSSVLSLSLTSL 27
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 554 GWCSLFRLPRSGGRCIANVSIQFESL 477
GW +L R GGR + +S+ SL
Sbjct: 2 GWVALGRCAGGGGRLSSVLSLSLTSL 27
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 554 GWCSLFRLPRSGGRCIANVSIQFESL 477
GW +L R GGR + +S+ SL
Sbjct: 2 GWVALGRCAGGGGRLSSVLSLSLTSL 27
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 554 GWCSLFRLPRSGGRCIANVSIQFESL 477
GW +L R GGR + +S+ SL
Sbjct: 2 GWVALGRCAGGGGRLSSVLSLSLTSL 27
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,449
Number of Sequences: 438
Number of extensions: 3460
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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