Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00390
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -3

Query: 683 SSLITKPTLSSCKDFVIVTALL*SPVDTYLNSRSIRSCLLRKATCESIIV 534
           +S +TK  + +   F++  +LL  P  TY      ++ L     C  II+
Sbjct: 278 NSKMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTGRKTVLKTNKYCNFIIL 327


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 551  TWLSSTSNFLWICCSSTCRPGTTTR 625
            TW SST+   W   ++T R  TTTR
Sbjct: 1041 TWWSSTTTSPW-WTTTTTRRTTTTR 1064


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 251 GCKIPNRIPVRDENDCDTRAYIKDDSVKIVTL 346
           G +  N IPV  +      AY++ D + I TL
Sbjct: 136 GLRCVNGIPVSSKTLASQSAYVQQDDLFIGTL 167


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 251 GCKIPNRIPVRDENDCDTRAYIKDDSVKIVTL 346
           G +  N IPV  +      AY++ D + I TL
Sbjct: 136 GLRCVNGIPVSSKTLASQSAYVQQDDLFIGTL 167


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 717 VRFSCAQESVDQLLDNKTDVIILQGLRDSHCLVVVPGRH 601
           V F C + SVD L DN +       +  +    V+PG +
Sbjct: 73  VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNY 111


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 717 VRFSCAQESVDQLLDNKTDVIILQGLRDSHCLVVVPGRH 601
           V F C + SVD L DN +       +  +    V+PG +
Sbjct: 306 VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNY 344


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 717 VRFSCAQESVDQLLDNKTDVIILQGLRDSHCLVVVPGRH 601
           V F C + SVD L DN +       +  +    V+PG +
Sbjct: 306 VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNY 344


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 436 RHSVDDDHADALVNDSRNVS 377
           R  V +D   AL+NDSR V+
Sbjct: 199 RFRVINDGIQALINDSRKVT 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,033
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)