Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00390
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        28   0.28 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    27   0.66 
AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.           25   3.5  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   4.6  

>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 448 LGLYRHSVDDDHADALVNDSRNVSGAVRNDGRAHERHYFDRVI 320
           L L   + D    +A+ N  R +S  ++ND   H R Y+ +++
Sbjct: 64  LTLIYEASDTSFGNAVSNTKRELSSVIQNDNIDHTRSYYKQLL 106


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 244 PTRVQDPQQDPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQR 381
           P + Q PQQ     + R +    HQG         ++AH  +QRQ+
Sbjct: 260 PQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQ 305


>AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 14  GPIRQAPQLRDQRGPEVSVLRPAVHRA---VQAAQAPLYWRA 130
           GP++Q  Q + Q GP     +P V  A    +  ++P Y R+
Sbjct: 19  GPLQQQQQQQQQHGPSGPQYQPGVPLAPYPTETQRSPAYGRS 60


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 602 CRPGTTTRQ*LSRSPCKMITSVLLSRSWSTDSC 700
           CRP TT      +    ++T+     SW  D+C
Sbjct: 16  CRPTTTNNDDCLQEQRTLLTTPTEGGSWHNDTC 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,119
Number of Sequences: 2352
Number of extensions: 17089
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)