Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00390
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 30 1.6
U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical pr... 30 2.2
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 30 2.2
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 30 2.2
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 30 2.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 2.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 6.6
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 6.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.7
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 28 8.7
AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical ... 28 8.7
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 81 PYIGQYKLLKLPFTGELIEHVDYW---GEGRIVNGGLYSGFRNCY 206
P IG +K+LK P LIE + YW G IV+ L + + +C+
Sbjct: 17 PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61
>U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical
protein C53B7.3 protein.
Length = 243
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 171 NGGLYSGFRNCYNVNRQYQEVSNGPDKGARSPTGSRCATRTTATPG 308
NGGLYS N YN N QY S ++ + +G+ C T + G
Sbjct: 56 NGGLYS---NTYNNNNQYDMNSQYGNQMGTTGSGTYCTTSYSCRSG 98
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 581 WICCSSTCRPGTTTRQ-*LSRSPCKMITSVLLSRSWSTDSCAHENL 715
W CS++C PGT RQ +R PC S RS + +C ++ +
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPCD--GSAHERRSCNVATCQNDGI 865
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 497 CPDYSCPLTYRSRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 625
CP +CP+T +S + W + + LW C++TC G R
Sbjct: 686 CPTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 581 WICCSSTCRPGTTTRQ-*LSRSPCKMITSVLLSRSWSTDSCAHENL 715
W CS++C PGT RQ +R PC S RS + +C ++ +
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPCD--GSAHERRSCNVATCQNDGI 865
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 497 CPDYSCPLTYRSRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 625
CP +CP+T +S + W + + LW C++TC G R
Sbjct: 686 CPTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 581 WICCSSTCRPGTTTRQ-*LSRSPCKMITSVLLSRSWSTDSCAHENL 715
W CS++C PGT RQ +R PC S RS + +C ++ +
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPCD--GSAHERRSCNVATCQNDGI 865
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 497 CPDYSCPLTYRSRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 625
CP +CP+T +S + W + + LW C++TC G R
Sbjct: 686 CPTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 587 CCSSTCRPGTTTRQ*LSRSPCKMITSVLLSRSWSTDSCAHENLTCSHTRTSCGPPDTTIS 766
C T P TTT S + TS S S STDS E+ T S T ++ D+T +
Sbjct: 172 CNVLTDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTT 231
Query: 767 Q 769
+
Sbjct: 232 E 232
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 207 NVNRQYQEVSNGPDKGARSPTGSRCATRTTATP 305
+V R Q V GP A SP+ SR ++RTT TP
Sbjct: 374 DVYRTPQSVRKGPMSAAPSPSPSR-SSRTTITP 405
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 207 NVNRQYQEVSNGPDKGARSPTGSRCATRTTATP 305
+V R Q V GP A SP+ SR ++RTT TP
Sbjct: 374 DVYRTPQSVRKGPMSAAPSPSPSR-SSRTTITP 405
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 253 VQDPQQDPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHYE 390
+Q Q PGA HP +H L Q+ ++ HH E H++
Sbjct: 1154 MQQQHQHPGAGGHLQLHPQMHMQMLPQHH--QQQQHHEEMMMMHHQ 1197
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 277 GARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 387
GA E H G H G + H HHS+ ++ +
Sbjct: 690 GAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 305 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 433
RAYI D + + I+ ARD+ R+V++ G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176
>AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical
protein C33E10.8 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 541 MDSHVAFLNKQLLMDLLFKYVS--TGDYNKAVTITKSLQDDNVGFVIKELV 687
MD+H +K+L D LFK ++ K++TIT+S D+ + +EL+
Sbjct: 89 MDNHEVVFDKRLTADQLFKKLAPFLRKLPKSITITES--SDDCFYFFRELI 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,964,333
Number of Sequences: 27780
Number of extensions: 365021
Number of successful extensions: 1148
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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