Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00389
         (393 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p pro...    30   0.95 
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    30   0.95 
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    29   2.9  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    29   2.9  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    29   2.9  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    27   6.7  

>AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p
           protein.
          Length = 870

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 144 LSGNSGRKHSRCCTSILRKFSGRQH 218
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
           protein.
          Length = 2139

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 144 LSGNSGRKHSRCCTSILRKFSGRQH 218
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 204 SGRQHCVTVDCCCHGSPTP 260
           SGR HCV   C CH  P P
Sbjct: 572 SGRGHCVCGACECHKRPNP 590


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 204 SGRQHCVTVDCCCHGSPTP 260
           SGR HCV   C CH  P P
Sbjct: 572 SGRGHCVCGACECHKRPNP 590


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 204 SGRQHCVTVDCCCHGSPTP 260
           SGR HCV   C CH  P P
Sbjct: 572 SGRGHCVCGACECHKRPNP 590


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
 Frame = +3

Query: 9   SLEETQKLKEHGASSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNS-GRKHS-RCC 182
           S E     K+ G   C       R C  +   SVDS SG   + QL  N   R H  R C
Sbjct: 418 SFETKVSTKQKGCDICSKENHPVRLCPRFLQMSVDSRSGYIKKKQLCLNCFARGHQLRDC 477

Query: 183 TSILRKFS--GRQH 218
           TS+   F+  GR H
Sbjct: 478 TSMHSCFTCKGRHH 491


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,884
Number of Sequences: 53049
Number of extensions: 347999
Number of successful extensions: 691
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)