Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00388
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 151 2e-36
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 151 2e-36
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 151 2e-36
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 123 5e-28
BC065286-1|AAH65286.1| 319|Homo sapiens SNW1 protein protein. 31 2.6
AB067230-1|BAC02268.1| 122|Homo sapiens immunoglobulin heavy ch... 30 4.5
S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit p... 30 5.9
S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit p... 30 5.9
M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit p... 30 5.9
M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit p... 30 5.9
L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit p... 30 5.9
BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein. 30 5.9
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 434
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 435 VLPPNWKYESSTASALVA 488
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 216
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 217 AQVRFVTGKKILR 255
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 123 bits (296), Expect = 5e-28
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 70 SQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 249
SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 250 LR 255
LR
Sbjct: 61 LR 62
Score = 99.5 bits (237), Expect = 6e-21
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = +3
Query: 255 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 416
I+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 63 ILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>BC065286-1|AAH65286.1| 319|Homo sapiens SNW1 protein protein.
Length = 319
Score = 31.1 bits (67), Expect = 2.6
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 69 LPVGAALPPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKD 248
+P G PP P ++ R+ Q WK ++NW NA+G+T ++ +
Sbjct: 218 IPRGPPSPP-AP-VMHSPSRKMTVKEQQEWKIPP-CISNWKNAKGYTIPLDKRLAADGRG 274
Query: 249 PPIMKAMGLAPDLPEDLYYLIKK---AVAMRKHLERNRKDKDSK 371
+ G L E LY +K AV MR +ER K K
Sbjct: 275 LQTVHINGNFAKLAEALYIADRKAREAVEMRAQVERKMAQKKKK 318
>AB067230-1|BAC02268.1| 122|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 122
Score = 30.3 bits (65), Expect = 4.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 168 SHSLTNWCNAEGFTWSCPSKIRNWQKDPPIMKAMGLA-PDLPEDLYY--LIKKAVAMRKH 338
+ +LT C GF++S NW + PP LA D +D YY +K + + K
Sbjct: 15 TQTLTLTCTFSGFSFSTSGMCVNWIRQPPGKALEWLALTDWDDDKYYSTSLKTRLTISKD 74
Query: 339 LERNR 353
+N+
Sbjct: 75 TSKNQ 79
>S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 29.9 bits (64), Expect = 5.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 177 LTNWCNAEGFTWSCPSKIRNWQK--DPPIMKAMGL-APDLPEDLYYLIKKAVAMRKHLER 347
L+ EG T P ++R + +P ++ L A P DLYYL+ + +M+ LER
Sbjct: 111 LSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLER 170
Query: 348 NRK 356
R+
Sbjct: 171 VRQ 173
>S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 29.9 bits (64), Expect = 5.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 177 LTNWCNAEGFTWSCPSKIRNWQK--DPPIMKAMGL-APDLPEDLYYLIKKAVAMRKHLER 347
L+ EG T P ++R + +P ++ L A P DLYYL+ + +M+ LER
Sbjct: 111 LSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLER 170
Query: 348 NRK 356
R+
Sbjct: 171 VRQ 173
>M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 29.9 bits (64), Expect = 5.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 177 LTNWCNAEGFTWSCPSKIRNWQK--DPPIMKAMGL-APDLPEDLYYLIKKAVAMRKHLER 347
L+ EG T P ++R + +P ++ L A P DLYYL+ + +M+ LER
Sbjct: 111 LSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLER 170
Query: 348 NRK 356
R+
Sbjct: 171 VRQ 173
>M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 29.9 bits (64), Expect = 5.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 177 LTNWCNAEGFTWSCPSKIRNWQK--DPPIMKAMGL-APDLPEDLYYLIKKAVAMRKHLER 347
L+ EG T P ++R + +P ++ L A P DLYYL+ + +M+ LER
Sbjct: 111 LSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLER 170
Query: 348 NRK 356
R+
Sbjct: 171 VRQ 173
>L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 29.9 bits (64), Expect = 5.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 177 LTNWCNAEGFTWSCPSKIRNWQK--DPPIMKAMGL-APDLPEDLYYLIKKAVAMRKHLER 347
L+ EG T P ++R + +P ++ L A P DLYYL+ + +M+ LER
Sbjct: 111 LSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLER 170
Query: 348 NRK 356
R+
Sbjct: 171 VRQ 173
>BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein.
Length = 798
Score = 29.9 bits (64), Expect = 5.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 177 LTNWCNAEGFTWSCPSKIRNWQK--DPPIMKAMGL-APDLPEDLYYLIKKAVAMRKHLER 347
L+ EG T P ++R + +P ++ L A P DLYYL+ + +M+ LER
Sbjct: 111 LSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLER 170
Query: 348 NRK 356
R+
Sbjct: 171 VRQ 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,822,756
Number of Sequences: 237096
Number of extensions: 1465130
Number of successful extensions: 3341
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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