Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00384
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    26   0.35 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
 Frame = +3

Query: 597 VSWRLISLWENNNVIFKILN------TEHEMYLKLDVNVDRY 704
           ++WR+   W   NV+ KI+       T    Y+ + +++DRY
Sbjct: 104 IAWRITVAWYAGNVLCKIIRFLQAVVTYSSTYVLVALSIDRY 145


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 165 YGAGYELPADLKTQTEFST 221
           YGAGY+L A  K  T  ST
Sbjct: 78  YGAGYDLAARRKNATREST 96


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 563 LGRWKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 697
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 563 LGRWKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 697
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 563 LGRWKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 697
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 563 LGRWKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 697
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,662
Number of Sequences: 336
Number of extensions: 3310
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)