Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00384
         (718 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45)     32   0.53 
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)             30   1.6  
SB_33399| Best HMM Match : Ank (HMM E-Value=0)                         29   5.0  
SB_41877| Best HMM Match : Agenet (HMM E-Value=1.9)                    28   8.7  
SB_41741| Best HMM Match : DUF59 (HMM E-Value=6.1e-08)                 28   8.7  
SB_17037| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.7  
SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.7  

>SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45)
          Length = 480

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 525 LDANVDRYKDRLTWGDGKDYTSYRVSW 605
           LD  +  YKD+LT GD   Y +YRV+W
Sbjct: 323 LDRIISAYKDKLT-GDNDYYQAYRVNW 348


>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
          Length = 1086

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 389 PCRSRTNCGTRATRTSSKITSRANSNSYSTKRELNSSATI 508
           P  S T CG  AT+T+S I+  A+++  +T   ++S   +
Sbjct: 730 PTVSTTTCGAAATKTTSAISQGASTSLQATTHSVSSPTNV 769


>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
          Length = 1416

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 577  KTTPATESAGDSSLFGKTTTSSSRY 651
            K TPA  S+G +++  KTTTS S +
Sbjct: 1044 KPTPAIPSSGSTAITAKTTTSGSNH 1068


>SB_41877| Best HMM Match : Agenet (HMM E-Value=1.9)
          Length = 237

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 591 SWCSLFHLPRLGGLC 547
           SW SL  LPR+GGLC
Sbjct: 124 SWSSLDGLPRVGGLC 138


>SB_41741| Best HMM Match : DUF59 (HMM E-Value=6.1e-08)
          Length = 476

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 189 RAVRTRLHSIS-PFYQLTLEILNVVRIFRISVCNDESF 79
           R +   + SI+ P + LTLE LNVV    I V +DES+
Sbjct: 416 REIFDMIRSINDPEHPLTLEELNVVEQALIDVSDDESY 453


>SB_17037| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 722

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 427 KDIVEDYFPSEFQLILDQKRIKLIGNHSIKLSNWMLTLTG 546
           KD+VE +   E    L+   + ++G+H I+   W  T+ G
Sbjct: 243 KDLVELFSNLERDSHLNNSMVFIMGDHGIRFGEWRKTMHG 282


>SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1499

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 591 SWCSLFHLPRLGGLC 547
           SW SL  LPR+GGLC
Sbjct: 460 SWSSLDGLPRVGGLC 474


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,636,017
Number of Sequences: 59808
Number of extensions: 433086
Number of successful extensions: 1595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)