Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00382
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   267   2e-73
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    28   0.24 
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    25   2.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.9  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  267 bits (655), Expect = 2e-73
 Identities = 125/168 (74%), Positives = 143/168 (85%), Gaps = 1/168 (0%)
 Frame = +1

Query: 7   QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 186
           QRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDPY
Sbjct: 8   QRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPY 67

Query: 187 KFKTRKELFIAPEALHR-PICLL*KKATLEVGNVMPVGAMPEGNIVCNLEEKMGDRGRLA 363
           +F+  K+LFIA E ++        ++A L++GNV+P+G MPEG IVCNLEEK GDRG+LA
Sbjct: 68  RFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLA 127

Query: 364 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRI 507
           R SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGGGRI
Sbjct: 128 RTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRI 175



 Score =  124 bits (300), Expect = 2e-30
 Identities = 54/58 (93%), Positives = 54/58 (93%)
 Frame = +3

Query: 510 KPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGKHQHIGKASTVKRGTSAGRK 683
           KPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGG HQHIGKASTVKRGT  GRK
Sbjct: 177 KPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRK 234


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +3

Query: 462 KQQRHGRYCCWRWTYC 509
           +QQ+HG++CC R ++C
Sbjct: 280 QQQQHGQHCCCRGSHC 295


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +3

Query: 159 GCCTLPRSIQVQDKEGALHCSRSSTQANLFIVKES 263
           GCC LP +   Q K+ + + +  +T+   +  ++S
Sbjct: 16  GCCALPANTNAQTKQDSSNNNNRTTELFAYPAEQS 50


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 94  RHGYIKGVVKDIIHDP 141
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 94  RHGYIKGVVKDIIHDP 141
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,125
Number of Sequences: 2352
Number of extensions: 17884
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)