Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00381
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 31 0.83
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 31 0.83
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 30 1.5
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical ... 29 2.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 3.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 3.4
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 29 4.4
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 29 4.4
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 29 4.4
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 29 4.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 5.9
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 31.1 bits (67), Expect = 0.83
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 290 ATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGAL-QTSPGLSTRPKIV 466
A TR + + +P + + T+ +T++ +P R RS S + + SP + V
Sbjct: 16 AKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQVSRESPPIRASKAFV 75
Query: 467 VAYGYSENSDDIQNSSVSLAKTAYTME 547
+Y Y DD N + T T+E
Sbjct: 76 ASYEYEAQKDDELNLPLGAIITLVTVE 102
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 31.1 bits (67), Expect = 0.83
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 290 ATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGAL-QTSPGLSTRPKIV 466
A TR + + +P + + T+ +T++ +P R RS S + + SP + V
Sbjct: 16 AKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQVSRESPPIRASKAFV 75
Query: 467 VAYGYSENSDDIQNSSVSLAKTAYTME 547
+Y Y DD N + T T+E
Sbjct: 76 ASYEYEAQKDDELNLPLGAIITLVTVE 102
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 356 PVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKIVVAYGYSENSDD 499
P S + K+L + +++S ++T S RPK+VV SE DD
Sbjct: 41 PKISNDSEKKVLKRSNSKTVSSPVKTPRNASKRPKVVVC-SSSEGEDD 87
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 269 SLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSAR 403
S R+S RA + ++ PTG+P+ T PVT+ T++S + P+A+
Sbjct: 169 SARTSTRAASG-NRTPTGTPNM--TRNVRPVTNRTSSSNVSPAAQ 210
>AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical
protein Y111B2A.9b protein.
Length = 326
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 118 VLPNTLLRYVPPREDPDRQRAGTPCRLL 201
V P+ L+ PP DP QR+GTP LL
Sbjct: 4 VSPSNLVFPPPPSPDPYTQRSGTPSALL 31
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 263 TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 442
T+++ SS ++ ES P S ++++ VT+E + S PS SG+ G
Sbjct: 482 TDAVSSSPSGSSSES--PNSSTGGSDSSSSESVTTEPSGSSTEPSGSSTEPSGSSTEPSG 539
Query: 443 LSTRPKIVVAYGYSE-NSDDIQNSSVSLAKTA 535
ST P G S+ +S ++ NSS T+
Sbjct: 540 SSTEPS-----GSSDSSSSELPNSSTDSGSTS 566
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 263 TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 442
T+++ SS ++ ES P S ++++ VT+E + S PS SG+ G
Sbjct: 482 TDAVSSSPSGSSSES--PNSSTGGSDSSSSESVTTEPSGSSTEPSGSSTEPSGSSTEPSG 539
Query: 443 LSTRPKIVVAYGYSE-NSDDIQNSSVSLAKTA 535
ST P G S+ +S ++ NSS T+
Sbjct: 540 SSTEPS-----GSSDSSSSELPNSSTDSGSTS 566
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 263 TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 442
T+++ SS ++ ES P S ++++ VT+E + S PS SG+ G
Sbjct: 482 TDAVSSSPSGSSSES--PNSSTGGSDSSSSESVTTEPSGSSTEPSGSSTEPSGSSTEPSG 539
Query: 443 LSTRPKIVVAYGYSE-NSDDIQNSSVSLAKTA 535
ST P G S+ +S ++ NSS T+
Sbjct: 540 SSTEPS-----GSSDSSSSELPNSSTDSGSTS 566
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 263 TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 442
T+++ SS ++ ES P S ++++ VT+E + S PS SG+ G
Sbjct: 482 TDAVSSSPSGSSSES--PNSSTGGSDSSSSESVTTEPSGSSTEPSGSSTEPSGSSTEPSG 539
Query: 443 LSTRPKIVVAYGYSE-NSDDIQNSSVSLAKTA 535
ST P G S+ +S ++ NSS T+
Sbjct: 540 SSTEPS-----GSSDSSSSELPNSSTDSGSTS 566
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 245 PRSSM*TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG 406
PRSS S S+ TT+ P S + +TAT P T TT + PS+ G
Sbjct: 1276 PRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT---PSSAG 1326
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +2
Query: 356 PVTSETTASKLLPSARGRSLSGALQTS----PGLSTRPKIVVAYGYSENSDDIQNSSVSL 523
P+ + KLL ARGR ++ A + PGL P V YG S D I+
Sbjct: 163 PIRTTMAVKKLLKKARGRVVTVASICARVGLPGLG--PYSVSKYGVSAYCDVIRQELRPF 220
Query: 524 AKTAYTMEPG 553
+ + +EPG
Sbjct: 221 GISVHVLEPG 230
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +2
Query: 356 PVTSETTASKLLPSARGRSLSGALQTS----PGLSTRPKIVVAYGYSENSDDIQNSSVSL 523
P+ + KLL ARGR ++ A + PGL P V YG S D I+
Sbjct: 188 PIRTTMAVKKLLKKARGRVVTVASICARVGLPGLG--PYSVSKYGVSAYCDVIRQELRPF 245
Query: 524 AKTAYTMEPG 553
+ + +EPG
Sbjct: 246 GISVHVLEPG 255
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 245 PRSSM*TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG 406
PRSS S S+ TT+ P S + +TAT P T TT + PS+ G
Sbjct: 1276 PRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT---PSSAG 1326
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 263 TNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 442
T + ++ TT + T +P+ TT T P T+ TTA + + T
Sbjct: 255 TTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTT 314
Query: 443 LSTRPK 460
+T PK
Sbjct: 315 TTTTPK 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,841,519
Number of Sequences: 27780
Number of extensions: 325592
Number of successful extensions: 813
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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