Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00378
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 133 1e-31
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 133 1e-31
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 133 1e-31
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 91 1e-18
Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 28 8.3
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 28 8.3
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 133 bits (322), Expect = 1e-31
Identities = 64/144 (44%), Positives = 86/144 (59%)
Frame = +2
Query: 284 ENGDWLGNETDPLIGFSWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLMDTQGTFDSS 463
+N W+ + PL GFSW+GGSER T GIL++ EPFI GE++AVLLMDTQG FDS
Sbjct: 107 DNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGAFDSQ 165
Query: 464 STVRDCSIIFALSTLYRPFRSIISKRIFKRTIFNTYSYLPSTGNYLKNEDGSKAFQMLMF 643
STV+DC+ IFALST+ + + + G + SK FQ L+F
Sbjct: 166 STVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLF 225
Query: 644 LIRDWPYYYEHAFGAKGGEELLKK 715
L+RDW + YE FG +GG+ +L +
Sbjct: 226 LVRDWSFPYEAEFGFQGGQRVLDR 249
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +3
Query: 51 NIEDLINMSGLRSVQVVNV--NDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAAAYRGG 224
++ED++ ++V+VV V + +H++ L L++ILL V D + V+ VA AYR G
Sbjct: 20 HVEDVLLPKEPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKG 79
Query: 225 KSFLLSYFLRTSTHRRKSETKM 290
KSFLL++FLR T R K++ M
Sbjct: 80 KSFLLNFFLRYLTWRSKADKVM 101
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 133 bits (322), Expect = 1e-31
Identities = 64/144 (44%), Positives = 86/144 (59%)
Frame = +2
Query: 284 ENGDWLGNETDPLIGFSWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLMDTQGTFDSS 463
+N W+ + PL GFSW+GGSER T GIL++ EPFI GE++AVLLMDTQG FDS
Sbjct: 107 DNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGAFDSQ 165
Query: 464 STVRDCSIIFALSTLYRPFRSIISKRIFKRTIFNTYSYLPSTGNYLKNEDGSKAFQMLMF 643
STV+DC+ IFALST+ + + + G + SK FQ L+F
Sbjct: 166 STVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLF 225
Query: 644 LIRDWPYYYEHAFGAKGGEELLKK 715
L+RDW + YE FG +GG+ +L +
Sbjct: 226 LVRDWSFPYEAEFGFQGGQRVLDR 249
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +3
Query: 51 NIEDLINMSGLRSVQVVNV--NDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAAAYRGG 224
++ED++ ++V+VV V + +H++ L L++ILL V D + V+ VA AYR G
Sbjct: 20 HVEDVLLPKEPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKG 79
Query: 225 KSFLLSYFLRTSTHRRKSETKM 290
KSFLL++FLR T R K++ M
Sbjct: 80 KSFLLNFFLRYLTWRSKADKVM 101
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 133 bits (322), Expect = 1e-31
Identities = 64/144 (44%), Positives = 86/144 (59%)
Frame = +2
Query: 284 ENGDWLGNETDPLIGFSWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLMDTQGTFDSS 463
+N W+ + PL GFSW+GGSER T GIL++ EPFI GE++AVLLMDTQG FDS
Sbjct: 107 DNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGAFDSQ 165
Query: 464 STVRDCSIIFALSTLYRPFRSIISKRIFKRTIFNTYSYLPSTGNYLKNEDGSKAFQMLMF 643
STV+DC+ IFALST+ + + + G + SK FQ L+F
Sbjct: 166 STVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLF 225
Query: 644 LIRDWPYYYEHAFGAKGGEELLKK 715
L+RDW + YE FG +GG+ +L +
Sbjct: 226 LVRDWSFPYEAEFGFQGGQRVLDR 249
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +3
Query: 51 NIEDLINMSGLRSVQVVNV--NDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAAAYRGG 224
++ED++ ++V+VV V + +H++ L L++ILL V D + V+ VA AYR G
Sbjct: 20 HVEDVLLPKEPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKG 79
Query: 225 KSFLLSYFLRTSTHRRKSETKM 290
KSFLL++FLR T R K++ M
Sbjct: 80 KSFLLNFFLRYLTWRSKADKVM 101
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 90.6 bits (215), Expect = 1e-18
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Frame = +2
Query: 269 TEKRNENGDWLGNETDPLIGFSWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLMDTQG 448
+++ + + +WL ++ L GF W+ G +R T GI ++ EP + + GE AV+LMDTQG
Sbjct: 94 SQQSDSSLEWLTDDCQ-LHGFHWRAGVKRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQG 152
Query: 449 TFDSSSTVRDCSIIFALSTLYRPFRSIISKRIFKRTIFNTYSYLPSTGNYLKNE--DGSK 622
TFD++ST + C +FALST+ + + S G + + K
Sbjct: 153 TFDNNSTYQQCMTVFALSTIVSSVQIYNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGK 212
Query: 623 AFQMLMFLIRDWPYYYEHAFGAKGGEELL 709
FQ L+F +RD+ E+ FG GG + L
Sbjct: 213 PFQQLVFCVRDFKNQEEYEFGENGGTDFL 241
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 81 LRSVQVVNVNDNH--NYVLEDNTLQRILLREDVKDLPLVVVSVAAAYRGGKSFLLSYFLR 254
+R VQ++ + + L ++ L +L + +V++SVA A+R GKSFLL++FL
Sbjct: 27 VRPVQIIAPSSTQPGKFRLNESALNSVLGHSACANKKIVIISVAGAFRKGKSFLLNFFLE 86
Query: 255 TSTHRRKSE 281
KS+
Sbjct: 87 YLYSLHKSQ 95
>Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical
protein F56H6.6 protein.
Length = 388
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 478 LLHNIC-ALYPISSVQ-IYNLKENLQEDDLQYLQLFTEYGKLLKKRRRL-QSVSDANVPY 648
L++ +C A Y + + ++N+ + ++EDD Y ++ T + K + R + V + N Y
Sbjct: 317 LIYGLCRANYTFNLLSHVFNVHQGIKEDDTMYSKVVTAHSKRYGRNRAFSRYVHEMNTAY 376
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 132 EDNTLQRILLREDVKDLPLVVVSVAAAYRGGKSFLLSYFLRTSTHRRKSETK 287
ED+ +R+ RE++ +PL V G K F +YF + +++++ K
Sbjct: 216 EDDEDERLKFREEISKMPLGKVKEMKEKLGIKLFNKTYFGTSEADKKRADEK 267
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -1
Query: 486 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPPFQLNPIKGSVS 307
M + T+++ V +I AT S +A G G S+ + L PP + P+ S
Sbjct: 1 MNKRPTMIIPPTVEISTIIDVATPSSSADTENRGDGESSVFIGQLQHPPLRRRPVSAMAS 60
Query: 306 FP 301
P
Sbjct: 61 LP 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,184,116
Number of Sequences: 27780
Number of extensions: 362530
Number of successful extensions: 1051
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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