Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00377
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 33 0.16
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z70311-12|CAA94381.3| 418|Caenorhabditis elegans Hypothetical p... 29 3.4
Z70306-7|CAA94327.3| 418|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 29 4.5
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 29 4.5
Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical pr... 29 4.5
U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical p... 28 7.9
AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 119 NEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPSRTSANFQNL 286
+ P ITP N+ + EQF+ ++ A N N++ IP + + N QNL
Sbjct: 142 HSPAITPFARNSEAARNIEQFIAQEEAANVPRANSQQQSPLIRPIPQQQALNIQNL 197
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 119 NEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPSRTSANFQNL 286
+ P ITP N+ + EQF+ ++ A N N++ IP + + N QNL
Sbjct: 142 HSPAITPFARNSEAARNIEQFIAQEEAANVPRANSQQQSPLIRPIPQQQALNIQNL 197
>Z70311-12|CAA94381.3| 418|Caenorhabditis elegans Hypothetical
protein T25B9.10 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 182 LTEDYANNGIELNNRFGDDASEKIPSRTSANFQNLKLQLNYPRTLNSHYFYLNIKKWQMN 361
L + A G E+++ + ++IPS T+ F L++ P LN H YL+ + W
Sbjct: 113 LAQKIAERGQEMDSDIFFISLQEIPS-TAPTFHEEALRILEP-VLNGHRLYLSHRAWSQM 170
Query: 362 FLAF 373
+ F
Sbjct: 171 VIVF 174
>Z70306-7|CAA94327.3| 418|Caenorhabditis elegans Hypothetical
protein T25B9.10 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 182 LTEDYANNGIELNNRFGDDASEKIPSRTSANFQNLKLQLNYPRTLNSHYFYLNIKKWQMN 361
L + A G E+++ + ++IPS T+ F L++ P LN H YL+ + W
Sbjct: 113 LAQKIAERGQEMDSDIFFISLQEIPS-TAPTFHEEALRILEP-VLNGHRLYLSHRAWSQM 170
Query: 362 FLAF 373
+ F
Sbjct: 171 VIVF 174
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 521 CRSISL*ILGFPSIHSSS*NRSCYSTRRSTHTYYHSTRLHCDGLRRRTPPCV--LARRYR 694
C+SI L GF S+ S+ ++ R + Y HSTR + L RT P + ++
Sbjct: 21 CKSI-LRDFGFTSVAQSANSKLAALLRSKINEYAHSTRAFME-LAGRTKPVTNDVIAAFK 78
Query: 695 HQPASL 712
HQ SL
Sbjct: 79 HQKVSL 84
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 628 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 524
G + +RG G T + A + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
T04A11.3 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 628 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 524
G + +RG G T + A + W+S NLE N++
Sbjct: 962 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 996
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 628 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 524
G + +RG G T + A + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190
>Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical
protein F02D10.4 protein.
Length = 369
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 104 LFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPSRT 265
+++R + TP + N + TEQ+ T D ++ L+ R+GD SE SRT
Sbjct: 89 IYERITQAYDTPGRQENGG-RYTEQYDTVDQSSKREHLSQRYGDHVSEN-NSRT 140
>U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical
protein B0286.3 protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 ISILSKMADVFESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGD 235
+S L+++A E+LELL + + + KGE + V ++ LT A N + N G
Sbjct: 1 MSSLAEIASRPENLELLAEGKTKQIFDIKGEKDYVLIRSKDSLT---AFNAVRKNELEG- 56
Query: 236 DASEKIPSRTSAN-FQNLKL 292
+I S+T++N F+ L+L
Sbjct: 57 --KSRIASKTTSNVFEYLQL 74
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 75 WLTFLKASSCCSIVQMSRSSHPRAKT---ILCFNSQN 176
+L+FL S+CCSI+ SH T LC NS N
Sbjct: 43 FLSFLSFSTCCSILGWFFLSHSTMHTYFSFLCTNSTN 79
>Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical
protein T15D6.4 protein.
Length = 424
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -3
Query: 578 FTSLSEYLGIQEFRGKYFCKILNLTFLVS 492
F+ SE+L I + GK +C ++++TFLVS
Sbjct: 391 FSKFSEHLNIFK-AGKAYCFVVSVTFLVS 418
>Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical
protein T09E11.4 protein.
Length = 671
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +1
Query: 382 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVKLR 516
+ EN L+ + C + NL FN C +A K++L+
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLK 491
>AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical
protein Y52B11A.1 protein.
Length = 179
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 399 TRFAIDMRLCTSKPEPSVVQLLLL 470
TRF I MR TSK EP++ +LL L
Sbjct: 96 TRFIISMRDFTSKEEPTLSELLNL 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,653,790
Number of Sequences: 27780
Number of extensions: 344944
Number of successful extensions: 933
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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