Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00377
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58450.1 68418.m07320 expressed protein predicted proteins fr... 29 2.4
At3g23920.1 68416.m03005 beta-amylase, putative / 1,4-alpha-D-gl... 29 4.2
At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) fa... 29 4.2
At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) fa... 29 4.2
At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identica... 29 4.2
At5g19600.1 68418.m02333 sulfate transporter, putative similar t... 28 7.3
At4g08340.1 68417.m01378 Ulp1 protease family protein contains P... 28 7.3
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 7.3
At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ... 27 9.6
At3g51895.1 68416.m05692 sulfate transporter (ST1) identical to ... 27 9.6
At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putativ... 27 9.6
>At5g58450.1 68418.m07320 expressed protein predicted proteins from
D.melanogaster, C.elegans and S.pombe
Length = 1065
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 444 PSVVQLLLLCGTDAQT*YQKSQVKNFAEVFPSKFLDSQV 560
P V++L L GT++ + +K + FP+KFL SQ+
Sbjct: 26 PDRVEILCLTGTESFDVKGQQLIKTLQKGFPTKFLSSQM 64
>At3g23920.1 68416.m03005 beta-amylase, putative /
1,4-alpha-D-glucan maltohydrolase, putative similar to
beta-amylase enzyme [Arabidopsis thaliana] GI:6065749,
beta-amylase PCT-BMYI from [Solanum tuberosum]; contains
Pfam profile PF01373: Glycosyl hydrolase family 14
Length = 575
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 289 IATQLPKDAEFSLFLPKHQEMANE--LLGVLMDVPENELQDLLSTCAFARVNLNPQLF 456
+A ++P E +L P++ + A+E L +++ +N + CAF + +NP+LF
Sbjct: 468 LAAEVPLAGENAL--PRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELF 523
>At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 460 YCYSVALMHRRDTRKVKLRILQKYFPLNSWIPKYSLKLVKPQLLFHQTFHAYLLSFHETT 639
YC+S+AL+ + + L Y P N W+ S LV+P +F ++ +L + E
Sbjct: 63 YCFSLALLIWFFASFILIENL--YGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPG 120
Query: 640 LR 645
L+
Sbjct: 121 LQ 122
>At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 460 YCYSVALMHRRDTRKVKLRILQKYFPLNSWIPKYSLKLVKPQLLFHQTFHAYLLSFHETT 639
YC+S+AL+ + + L Y P N W+ S LV+P +F ++ +L + E
Sbjct: 63 YCFSLALLIWFFASFILIENL--YGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPG 120
Query: 640 LR 645
L+
Sbjct: 121 LQ 122
>At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identical
to sulfate tansporter Sultr1;3 [Arabidopsis thaliana]
GI:10716805; contains Pfam profile PF00916: Sulfate
transporter family; contains Pfam profile PF01740: STAS
domain; contains TIGRfam profile TIGR00815: sulfate
permease
Length = 656
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 478 LMHRRDTRKVKLRIL--QKYFPLNSWIPKYSLKLVKPQLL 591
L H +D K K +L Q FP+ W KY+LKL + L+
Sbjct: 59 LRHFKDQSKSKKLMLGIQSVFPVIEWGRKYNLKLFRGDLI 98
>At5g19600.1 68418.m02333 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain; supporting cDNA
gi|14141683|dbj|AB061739.1|
Length = 634
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 499 RKVKLRILQKYF-PLNSWIPKYSLKLVKPQLL 591
R +K + L +YF P+ W+PKY ++ +K +L
Sbjct: 52 RLLKTKKLLEYFVPIFEWLPKYDMQKLKYDVL 83
>At4g08340.1 68417.m01378 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 988
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 206 GIELNNRFGDDASEKIPSRTSANFQNLKLQLNYPRTLNSHY 328
G + FGD S++ P+R A+ N+ + P N+ +
Sbjct: 565 GADFGTNFGDGGSQEAPNRVVADVVNVDADKDTPEDANTDF 605
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 511 LRILQKYFPLNSWIPKYSLKLVKPQLL 591
+R Q FP+ W P+YS L+K ++
Sbjct: 45 IRAAQYIFPILQWCPEYSFSLLKSDVV 71
>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1934
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +2
Query: 5 FCEVCKVI*RTRFIF-YLISILSKMADVFESLELLFDRPNEPLITPKGENNSVFQLTEQF 181
F EV + + RFI+ + +S L ++D E + E T K + +VFQ +
Sbjct: 929 FLEVDMSMQQQRFIYEFRMSGLPLLSDKLEKFLSILLSDYEDQGTYKSQLINVFQDVIEI 988
Query: 182 LTEDYANNGIELNNRFGDDASEKIPSRTSANFQNLKLQL 298
+T+D NG E+ R + + + F+ + + L
Sbjct: 989 ITQDLLVNGHEILERARVHSPDIKNEKKEQRFEKINIHL 1027
>At3g51895.1 68416.m05692 sulfate transporter (ST1) identical to
sulfate transporter [Arabidopsis thaliana] GI:2285885
Length = 658
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +1
Query: 526 KYF-PLNSWIPKYSLKLVKPQLL 591
KYF P+ W P+Y+LK K L+
Sbjct: 65 KYFLPIFEWAPRYNLKFFKSDLI 87
>At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to SP|O22682 Probable
cysteine synthase, chloroplast precursor {Arabidopsis
thaliana}, similar to SP|P31300 Cysteine synthase,
chloroplast precursor {Capsicum annuum}
Length = 404
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 440 RFTRAKAHVDSKSCNSFSGTSMRTPRSSFAIS*CLGRNNENSAS 309
RF+ AK + S +S S ++RTP SSF + G+++ + S
Sbjct: 25 RFSTAKLSLFSFHHDSSSSLAVRTPVSSFVVGAISGKSSTGTKS 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,536,974
Number of Sequences: 28952
Number of extensions: 317790
Number of successful extensions: 881
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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