Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00375
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      24   4.6  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   6.1  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   8.1  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 584 VFDDTNLCAINLGNIS 631
           +F+DTNLCAI+   ++
Sbjct: 104 LFEDTNLCAIHAKRVT 119


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 584 VFDDTNLCAIN 616
           +F+DTNLCAI+
Sbjct: 102 LFEDTNLCAIH 112


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 250  RFSSKGGSSMTTFEGTGLAVSG 185
            R   + GS++  F GTG  VSG
Sbjct: 1031 RIDERHGSAVCDFTGTGPEVSG 1052


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,084
Number of Sequences: 2352
Number of extensions: 8155
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)