Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00375
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013949-1|AAH13949.1| 223|Homo sapiens coiled-coil domain cont... 107 3e-23
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 31 4.5
X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. 30 5.9
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 30 5.9
BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for IM... 30 5.9
BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for IM... 30 5.9
AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 30 5.9
BT006693-1|AAP35339.1| 388|Homo sapiens SRY (sex determining re... 30 7.8
BC071947-1|AAH71947.1| 388|Homo sapiens SRY (sex determining re... 30 7.8
AK223574-1|BAD97294.1| 388|Homo sapiens SRY-box 7 variant protein. 30 7.8
AK055556-1|BAB70955.1| 388|Homo sapiens protein ( Homo sapiens ... 30 7.8
AJ409320-1|CAC84226.1| 388|Homo sapiens SOX7 protein protein. 30 7.8
>BC013949-1|AAH13949.1| 223|Homo sapiens coiled-coil domain
containing 124 protein.
Length = 223
Score = 107 bits (257), Expect = 3e-23
Identities = 49/83 (59%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = +2
Query: 248 SKRIQLDGEL-AQTVDEALAILSDKPEV-DRHPEKRLKAAFTAFEQINLPRLKAENPSLR 421
++R+ +G + A+T+++A+A+LS E DRHPE+R++AAFTAFE+ LPRLK ENP++R
Sbjct: 133 NRRVLEEGSVEARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQENPNMR 192
Query: 422 LSQLKELLKKEWHKSPQNPLNQR 490
LSQLK+LLKKEW +SP NP+NQR
Sbjct: 193 LSQLKQLLKKEWLRSPDNPMNQR 215
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 329 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKS 466
D + KRL +AF F P++K E+P L + + + L + W+ +
Sbjct: 91 DPNAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 136
>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
Length = 1912
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 308 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 478
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217
>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
Length = 1937
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 308 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 478
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 157 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 214
>BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for
IMAGE:5018055) protein.
Length = 355
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 308 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 478
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217
>BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for
IMAGE:4907274) protein.
Length = 355
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 308 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 478
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217
>AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1
protein.
Length = 191
Score = 30.3 bits (65), Expect = 5.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 329 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKS 466
D + KR +AF F P++K E+P L +S + + L + W+ +
Sbjct: 91 DSNAPKRPPSAFLLFCSEYCPKIKGEHPGLPISDVAKKLVEMWNNT 136
>BT006693-1|AAP35339.1| 388|Homo sapiens SRY (sex determining
region Y)-box 7 protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 317 KPEVDRHPEKRLKA---AFTAFEQINLPRLKAENPSLRLSQLKELLKKEW 457
+P D+ E R++ AF + + RL +NP L ++L ++L K W
Sbjct: 34 RPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSW 83
>BC071947-1|AAH71947.1| 388|Homo sapiens SRY (sex determining
region Y)-box 7 protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 317 KPEVDRHPEKRLKA---AFTAFEQINLPRLKAENPSLRLSQLKELLKKEW 457
+P D+ E R++ AF + + RL +NP L ++L ++L K W
Sbjct: 34 RPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSW 83
>AK223574-1|BAD97294.1| 388|Homo sapiens SRY-box 7 variant protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 317 KPEVDRHPEKRLKA---AFTAFEQINLPRLKAENPSLRLSQLKELLKKEW 457
+P D+ E R++ AF + + RL +NP L ++L ++L K W
Sbjct: 34 RPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSW 83
>AK055556-1|BAB70955.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ30994 fis, clone HLUNG1000076, highly similar to
Mus musculus mRNA for mSox7. ).
Length = 388
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 317 KPEVDRHPEKRLKA---AFTAFEQINLPRLKAENPSLRLSQLKELLKKEW 457
+P D+ E R++ AF + + RL +NP L ++L ++L K W
Sbjct: 34 RPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSW 83
>AJ409320-1|CAC84226.1| 388|Homo sapiens SOX7 protein protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 317 KPEVDRHPEKRLKA---AFTAFEQINLPRLKAENPSLRLSQLKELLKKEW 457
+P D+ E R++ AF + + RL +NP L ++L ++L K W
Sbjct: 34 RPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSW 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,983,908
Number of Sequences: 237096
Number of extensions: 1177461
Number of successful extensions: 6737
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6722
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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