Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00374X
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.0  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 32  TSTLRSSTMLSQELEPTKKPSSRSCARIPTMVSVP 136
           ++T+ +S+     + PT   +S SC  +P+M   P
Sbjct: 10  STTMATSSNAMSPMTPTYSMNSMSCVSMPSMNCSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 79   DEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 207
            D ++  +++C  +N+      A+Y Q  GK L SD+  D   H
Sbjct: 1818 DPKSEFKVVCYFTNW------AWYRQGVGKYLPSDIDPDLCTH 1854



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 103  LCTHSNYGIRTISA 144
            LCTH NYG   + +
Sbjct: 2349 LCTHINYGFAVLDS 2362


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 465 SQCYQRILS*SSPQCLFRSKLRTRRR 388
           SQ   R+L  S P C +  + ++RR+
Sbjct: 394 SQEESRVLDLSKPGCSYTGEQKSRRK 419


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -2

Query: 113 CVHRISMMASSSVPIPETASWSSLA*KWGR 24
           C+ ++++   +SV   E   W++    WG+
Sbjct: 171 CIPQLTIFTYTSVGEDEYDCWATFQEPWGK 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,932
Number of Sequences: 336
Number of extensions: 2964
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)