Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00374X
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 52 3e-07
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 49 2e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 48 4e-06
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 47 1e-05
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 42 4e-04
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 40 0.002
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 38 0.006
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 38 0.008
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 36 0.033
04_03_0920 + 20826876-20829293 31 0.93
08_02_1251 - 25592537-25593380,25593589-25593893 29 3.7
01_05_0142 - 18564697-18564792,18564824-18564928,18565606-185656... 29 3.7
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 5.0
04_03_0923 + 20843477-20845044,20846081-20846996 28 6.5
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 27 8.7
03_03_0225 - 15587557-15588774 27 8.7
01_06_1100 + 34530132-34530485,34530544-34530705 27 8.7
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +1
Query: 34 FYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 213
++AK LH+A+ G+GT++ +I ++ T + ++ I A Y + Y +SL + +TSG+++
Sbjct: 276 YFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYR 335
Query: 214 RLCVSLCMANR 246
+SL +R
Sbjct: 336 TFLLSLIGRDR 346
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +2
Query: 506 RFFAERLYYSMKGIGTNDKTLIRIVVSRSEID 601
++FA+ L+ +MKG+GTND TLIR+V +R+E+D
Sbjct: 275 KYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVD 306
Score = 33.9 bits (74), Expect = 0.100
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +1
Query: 28 PHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 207
P A +LH A G G D A+ IL I Y +Y + L L + SGH
Sbjct: 13 PRRDAIDLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGH 72
Query: 208 FKR 216
KR
Sbjct: 73 HKR 75
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 40 AKELHDAVSG-IGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDL-KGDTSGHFK 213
A+EL+ A +GTDE I + S + ++A Y +Y +SLE + + T+ +
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLEKVIYRSCTAAYAL 236
Query: 214 RLCVSLCMAN 243
L SL N
Sbjct: 237 ALVFSLSEFN 246
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 40 AKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLY----GKSLESDLKGDTSGH 207
A LH A++G TD A E++C+ + + + Y + G LE D+ SG
Sbjct: 89 AAVLHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEHDVAVRASGD 148
Query: 208 FKRLCVSLCMANRDE 252
+RL ++ + R E
Sbjct: 149 HQRLLLAYLRSPRYE 163
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +3
Query: 324 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 482
GT+++ ++ TR+ ++ I AEY + + D++ E SG+ +L++
Sbjct: 289 GTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/66 (31%), Positives = 40/66 (60%)
Frame = +1
Query: 34 FYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 213
++AK L ++ G+GTD+ +I ++ T + ++ I A Y + Y KSL + +TSG+++
Sbjct: 233 YFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYR 292
Query: 214 RLCVSL 231
+SL
Sbjct: 293 TFLLSL 298
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = +2
Query: 506 RFFAERLYYSMKGIGTNDKTLIRIVVSRSEID 601
++FA+ L SMKG+GT+D TLIR+VV+R+EID
Sbjct: 232 KYFAKVLRKSMKGMGTDDSTLIRVVVTRTEID 263
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 40 AKELHDA-VSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 216
AK+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TSG+F+
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFEL 218
Query: 217 LCVSLCMANRDENRASMKAQLKPM 288
+++ + + K K M
Sbjct: 219 ALLTILRCAENPAKYFAKVLRKSM 242
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +1
Query: 40 AKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 219
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG ++L
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Query: 220 CVS 228
++
Sbjct: 136 LLA 138
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 324 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 482
GTD+S +++TR+ ++ I AEY K + ++I E SG+ +L++
Sbjct: 246 GTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/66 (30%), Positives = 41/66 (62%)
Frame = +1
Query: 34 FYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 213
++ K + A++G+GTDE ++ I+ T + ++ I+ Y++ LE + GDTSG ++
Sbjct: 247 YFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYE 306
Query: 214 RLCVSL 231
R+ ++L
Sbjct: 307 RMLLAL 312
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 321 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 476
WGT+E++ SIL R Q R I Y G+++ SI E SG E+ ++
Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 73 GTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDE 252
G+ ++EI C + + Y + + +SLE D+ +G F++L V L A R E
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYE 161
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 19 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDT 198
T L H AK LH+ + ++ II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADP 226
Query: 199 SGHF 210
F
Sbjct: 227 KDEF 230
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 46 ELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCV 225
+L A G GT+E II IL R I Y YG+ L + + SG F+R +
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Query: 226 --SLCMANRD 249
+L A RD
Sbjct: 79 LWTLDPAERD 88
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = +2
Query: 506 RFFAERLYYSMKGIGTNDKTLIRIVVSRSEID 601
R+F + + ++ G+GT++ +L RI+ +R+E+D
Sbjct: 246 RYFEKVIRLAIAGMGTDENSLTRIITTRAEVD 277
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = +1
Query: 22 PLPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTS 201
P P A+ + AV G GTDE A+IEIL + I+ YE LY ++L L + S
Sbjct: 57 PSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELS 116
Query: 202 GHFKRLCVSLCM--ANRDENRA--SMKAQLKPMLKHWPPLVKV 318
G F+ + M A RD A ++K + K L+H LV+V
Sbjct: 117 GDFRSALMLWTMDPAARDAKLANEALKKKKKGELRHIWVLVEV 159
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/73 (27%), Positives = 42/73 (57%)
Frame = +1
Query: 13 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKG 192
L +P HF A+ + ++ G+GTDEE + + + + + + Y+ Y ++ +D++G
Sbjct: 293 LTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRG 351
Query: 193 DTSGHFKRLCVSL 231
DTSG++ ++L
Sbjct: 352 DTSGYYMNTLLTL 364
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 321 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 476
WGTDE+ IL R+ Q +I YE L + + D + E SG ++
Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 506 RFFAERLYYSMKGIGTNDKTLIRIVVSRSEID 601
+ FAE + S+ G+GT+++ L R +VSR+E+D
Sbjct: 298 KHFAEVIRTSILGLGTDEEMLTRGIVSRAEVD 329
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 40 AKELHDAVSGIG--TDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKG 192
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDG 276
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 1 VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLES 180
++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++L
Sbjct: 4 IVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQ 63
Query: 181 DLKGDTSGHFKR 216
L+ + SG +R
Sbjct: 64 RLQSELSGDLER 75
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 321 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGM 473
WGTDE +L R Q +QI YE +++ ++ E SG +E+ M
Sbjct: 27 WGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 330 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 494
DE++ + RS QLR F Y+ + G D ++KK G E+ + + KC+
Sbjct: 187 DEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCI 241
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 40 AKELHDAV-SGIGT-DEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 213
A+ L+DA SG+G+ DE I+E+ S +R Y+ +YG LK + G F+
Sbjct: 172 ARRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFE 231
Query: 214 R 216
+
Sbjct: 232 Q 232
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 55 DAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 228
DA+ G D + ++E++CT + + I Y+ Y SLE D+ TSG + ++
Sbjct: 115 DALFGRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLA 172
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +1
Query: 4 IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESD 183
I+ T ++ K + A+ G+GTDE ++ I+ T + ++ I Y++ LE
Sbjct: 162 IIRCFTCPDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERA 221
Query: 184 LKGDTSGHFKRLCVSL 231
+ DT+ ++ + ++L
Sbjct: 222 VAKDTTRDYEDILLAL 237
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 43 KELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 219
++L A G GT+E+ II IL R I Y + YG+ L L + G F+ L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELL 76
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 321 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE 464
WGT+E + SIL R Q R I Y G+++ ++ E G E
Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE 74
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = +2
Query: 506 RFFAERLYYSMKGIGTNDKTLIRIVVSRSEID 601
R+F + + ++ G+GT++ +L RI+ +R+E+D
Sbjct: 171 RYFEKVIRLALGGMGTDENSLTRIITTRAEVD 202
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 506 RFFAERLYYSMKGIGTNDKTLIRIVVSRSEID 601
+ FAE + +S+ G+GT + L R++VSR+EID
Sbjct: 233 KHFAEVIRHSILGLGTYEDMLTRVIVSRAEID 264
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 324 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 500
G DE + I+ TRS QLR F Y G DI + I G + + C+ S
Sbjct: 174 GEDEVV--RIVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTS 230
>04_03_0920 + 20826876-20829293
Length = 805
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 25 LPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSG 204
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 595 LGAAHHDADERLVVGADALHR-VVQALSEEPTLLFTHLAIASMPFSMLPE 449
+GAAHHDA+ VG +R VV A ++E T H IA + F+ L E
Sbjct: 29 IGAAHHDAELVPQVGRWHCNRFVVVAQNDEATYECNH--IARVKFTQLDE 76
>01_05_0142 -
18564697-18564792,18564824-18564928,18565606-18565678,
18566262-18567637
Length = 549
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/78 (21%), Positives = 39/78 (50%)
Frame = +1
Query: 136 ISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENRASMKAQLKPMLKHWPPLVK 315
+SA + +L GK+++ DL G HF + +C A + ++ + ++ ++ HW ++
Sbjct: 421 VSAIFAKL-GKNVDFDLNGR---HFLK---HVCHAMEEHYQSRINSECNSIVTHWRKMIN 473
Query: 316 VNGEPTNQSSTPSLSLAP 369
+ PT+ ++ P
Sbjct: 474 LLNFPTSVVKASLINAPP 491
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 301 PPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKL*PEKTL 426
P ++K + P+ ++PS S A D S+PST PE+T+
Sbjct: 2006 PAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 25 LPHFYAKELHDAVSGIGTDEEAIIEILCTHSNYGIRTISAFYEQLYGKSLESDLKGDTSG 204
LPH A+ + A S + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWHDELYNVKQLSDSSSDGNG 424
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 54 RCCLRNWNRRRSHHRDPVHAFQLWYPYHIRILRTTVRQEPGIGLKRR 194
RC R W R P H QL P R+ T R E G G RR
Sbjct: 630 RCQYREWIDTRRVLTPPSHVVQLELPEQYRV--TKARFERGEGSSRR 674
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 141 RILRTTVRQEPGIGLKRRHVGTLQ 212
R+ +TT R++ G GLKRR G ++
Sbjct: 291 RVKKTTARKKVGAGLKRRSFGGVE 314
>01_06_1100 + 34530132-34530485,34530544-34530705
Length = 171
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 559 VVGADALHRVVQALSEEPTLLFTHLAIASMPFSMLP 452
++GAD R + S +P + HL +A +P+ LP
Sbjct: 29 LLGADTTLRTLLVHSLDPEFDYIHLKLAFLPYGELP 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,625,412
Number of Sequences: 37544
Number of extensions: 361043
Number of successful extensions: 1178
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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