Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00373
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    44   1e-04
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    33   0.25 
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z73104-7|CAI59116.1|  513|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z73104-6|CAI59115.1|  431|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z73104-5|CAI59114.1|  439|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z73104-4|CAA97435.2|  547|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF078157-5|AAN84817.1|  379|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = +1

Query: 253 VTAAHCTRRWDADELY-VRLGEYDLQRTNDSRSYNFKVVEKIQHPNFELSSYHNDIAILK 429
           +TAAHC    +    Y V +G++D  +T+ +    +  +++I         + +DIAIL+
Sbjct: 65  ITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFY--LQRIHFYPLYKDIFSHDIAILE 122

Query: 430 LHRPAV-FNTYVWPICLPPADLDLT 501
           +  P + FN Y  PICLP  D   T
Sbjct: 123 IPYPGIEFNEYAQPICLPSKDFVYT 147



 Score = 33.5 bits (73), Expect = 0.14
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 516 VIGWGTQWYGGPHSNVLMEVSVPVWDHQKCVDA--FVDSVFTETVCAGGLEGGKDAC 680
           V GWG+   G  ++  L    +P+ +   CV++     S+     CAG LEGG D+C
Sbjct: 154 VSGWGSM--GLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSC 208


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +1

Query: 253 VTAAHCTRRWDADELY-VRLGEYDLQRTNDSRSYNFKVVEKIQHPNFEL---SSYHNDIA 420
           +TAAHC  +      Y VR+G +   R+     +    V    HP + +   SSY  D A
Sbjct: 95  LTAAHCFAKDRRPTSYSVRVGGH---RSGSGSPHRVTAVSI--HPWYNIGFPSSY--DFA 147

Query: 421 ILKLHRPAVFNTYVWPICLP 480
           I+++H P   +T   PICLP
Sbjct: 148 IMRIHPPVNTSTTARPICLP 167



 Score = 31.9 bits (69), Expect = 0.44
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +2

Query: 140 RITGSRPANPREWPWMASITPYGFEQYCGGVLITDRHV-*RPRIVQEDGTPTNYT 301
           R+ G   ++P  WPW   +        CGG LI    V        +D  PT+Y+
Sbjct: 57  RLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYS 111


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 409 NDIAILKLHRPAVFNTYVWPICLPPA 486
           NDIA+ +L  P  F+  ++P CLP A
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLPSA 146


>Z73104-7|CAI59116.1|  513|Caenorhabditis elegans Hypothetical
           protein K08D8.4d protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 255 YTCRSVMRTPPQYCSNPY 202
           YTC ++MR P Q  S PY
Sbjct: 20  YTCANIMRNPTQNLSEPY 37


>Z73104-6|CAI59115.1|  431|Caenorhabditis elegans Hypothetical
           protein K08D8.4c protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 255 YTCRSVMRTPPQYCSNPY 202
           YTC ++MR P Q  S PY
Sbjct: 20  YTCANIMRNPTQNLSEPY 37


>Z73104-5|CAI59114.1|  439|Caenorhabditis elegans Hypothetical
           protein K08D8.4b protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 255 YTCRSVMRTPPQYCSNPY 202
           YTC ++MR P Q  S PY
Sbjct: 20  YTCANIMRNPTQNLSEPY 37


>Z73104-4|CAA97435.2|  547|Caenorhabditis elegans Hypothetical
           protein K08D8.4a protein.
          Length = 547

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 255 YTCRSVMRTPPQYCSNPY 202
           YTC ++MR P Q  S PY
Sbjct: 20  YTCANIMRNPTQNLSEPY 37


>AF078157-5|AAN84817.1|  379|Caenorhabditis elegans Hypothetical
           protein F25E5.7 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 415 IAILKLHRPAVFNTYVWPICL 477
           + IL+L +P   N  +WP+C+
Sbjct: 166 VLILELKKPLELNPSIWPVCI 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,066,739
Number of Sequences: 27780
Number of extensions: 346614
Number of successful extensions: 1015
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)