Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00372
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.48
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.1
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.6
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.6
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36) 29 3.4
SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.4
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.4
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.4
SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38) 29 4.5
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.5
SB_54952| Best HMM Match : 7tm_1 (HMM E-Value=7.2e-16) 29 4.5
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_59700| Best HMM Match : SCP (HMM E-Value=1.6e-14) 28 5.9
SB_27631| Best HMM Match : zf-C2H2 (HMM E-Value=0.0041) 28 5.9
SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.8
SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -2
Query: 457 TIALMYSASNIKCCTH-YLPTYCNFFAPTYSLVAYYSG-YAWTGLIVAS 317
T +L+ + +N+ TH L Y N FAPT+SL+A Y+ +A T ++A+
Sbjct: 96 THSLLANYTNLFAPTHSLLANYTNLFAPTHSLLANYTNLFAMTHSLLAN 144
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -2
Query: 457 TIALMYSASNIKCCTH-YLPTYCNFFAPTYSLVAYYSG-YAWTGLIVAS 317
T +L+ + +N+ TH L Y N FAPT+SL+A Y+ +A T ++A+
Sbjct: 124 THSLLANYTNLFAMTHSLLANYTNLFAPTHSLLANYTNLFAPTHSLLAN 172
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 478 HVTLQYLTIALMYSASNIKCCTH-YLPTYCNFFAPTYSLVAYYS 350
+ L +T +L+ + +N+ TH L Y N FAPT+SL+A Y+
Sbjct: 131 YTNLFAMTHSLLANYTNLFAPTHSLLANYTNLFAPTHSLLANYT 174
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 457 TIALMYSASNIKCCTH-YLPTYCNFFAPTYSLVAYYS 350
T +L+ + +N+ TH L Y N FAPT+SL+A Y+
Sbjct: 222 THSLLANYTNLFATTHSLLANYTNLFAPTHSLLANYT 258
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 457 TIALMYSASNIKCCTHYLPT-YCNFFAPTYSLVAYYS 350
T +L+ + +N+ TH LP Y N FAPT++ +A Y+
Sbjct: 166 THSLLANYTNLFAPTHSLPANYTNLFAPTHTTLANYT 202
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 457 TIALMYSASNIKCCTH-YLPTYCNFFAPTYSLVAYYS 350
T +L+ + +N+ TH L Y N FAPT+SL A Y+
Sbjct: 152 THSLLANYTNLFAPTHSLLANYTNLFAPTHSLPANYT 188
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -2
Query: 433 SNIKCCTH-YLPTYCNFFAPTYSLVAYYSG-YAWTGLIVAS 317
+N+ TH L Y N FAPT+SL+A Y+ +A T ++A+
Sbjct: 90 TNLFAPTHSLLANYTNLFAPTHSLLANYTNLFAPTHSLLAN 130
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 406 LPTYCNFFAPTYSLVAYYSG-YAWTGLIVAS 317
L Y N FAPT+SL+A Y+ +A T ++A+
Sbjct: 212 LANYTNLFAPTHSLLANYTNLFATTHSLLAN 242
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 406 LPTYCNFFAPTYSLVAYYSG-YAWTGLIVAS 317
L Y N FAPT+SL+A Y+ +A T ++A+
Sbjct: 86 LANYTNLFAPTHSLLANYTNLFAPTHSLLAN 116
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNKVI*IRLKQL 112
H C MC + + K ALV H K HL + +RLK L
Sbjct: 176 HACWMCHKAFKHKTALVLHKKTHLEYQEWR-VRLKTL 211
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
HVC +C++ +S +AL H +IHL +
Sbjct: 424 HVCDICKKMLASSSALSRHKRIHLQKKQ 451
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIHLN 76
C C++ +SS L TH KIH N
Sbjct: 379 CEECDKAFSSSCGLSTHKKIHFN 401
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C CE+ + +KA L HF+ H
Sbjct: 517 HECTQCEKAFITKAKLDRHFRTH 539
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIHLNNNK 85
C +CE+ + K +L H +IH NN+K
Sbjct: 547 CEICEKSFRDKDSLNIHMRIH-NNDK 571
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
+VC C++ +SSK+ L H K+H
Sbjct: 447 YVCQTCDKTFSSKSNLDQHLKLH 469
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H CP C R + ++ L++H +IH
Sbjct: 1293 HWCPTCGRGFLARIGLISHLRIH 1315
>SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 268
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C +CE+ + +K L HF+ H
Sbjct: 78 HKCSICEKGFKTKRCLTKHFRTH 100
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIHLN 76
C CE+ Y+ K+ L H K+H N
Sbjct: 648 CNWCEKSYTRKSNLTAHLKMHKN 670
>SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36)
Length = 477
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C +C++R+S ++L H ++H
Sbjct: 304 HECHVCQKRFSQSSSLNKHMRVH 326
>SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 462
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C CE R++ L TH K+H
Sbjct: 201 HQCGKCEMRFTQHEMLKTHLKVH 223
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIH 70
CP+C +R+ +++AL H K+H
Sbjct: 556 CPLCTQRFVNQSALNVHQKVH 576
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIH 70
C +C++R+S + ++TH +IH
Sbjct: 467 CTICKKRFSKQGNMITHARIH 487
>SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1766
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIHLNNNK 85
CP C R + ++ L++H + H NK
Sbjct: 974 CPQCPRLFRAQIGLISHLRTHKPTNK 999
>SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C +C +R+S ++L H ++H
Sbjct: 381 HQCSVCSKRFSQSSSLNKHMRVH 403
>SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C +C++R+S ++L H ++H
Sbjct: 315 HECHVCKKRFSQSSSLNKHMRVH 337
>SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C +CE+ ++ A LV H + H
Sbjct: 381 HQCHLCEKAFTKPATLVDHIRTH 403
>SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLN 76
+VCP C + ++ + L TH + H N
Sbjct: 677 YVCPQCNKAFNRASNLHTHMRTHTN 701
>SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38)
Length = 509
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIH 70
C +C RR++ +++ TH +IH
Sbjct: 429 CHICHRRFAQSSSVTTHMRIH 449
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 5 VCPMCERRYSSKAALVTHFKIHLN 76
VC +C++ + SK AL+ H HL+
Sbjct: 508 VCSVCDKEFRSKTALINHQVKHLD 531
>SB_54952| Best HMM Match : 7tm_1 (HMM E-Value=7.2e-16)
Length = 357
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 428 YQMLHTLSTYLL*FFCPYLFT 366
Y++ + ++ +L FFCPYLFT
Sbjct: 242 YKLSYMAASVILVFFCPYLFT 262
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 5 VCPMCERRYSSKAALVTHFKIHLN 76
VC +C++ + SK AL+ H HL+
Sbjct: 440 VCSVCDKEFRSKTALINHQVKHLD 463
>SB_59700| Best HMM Match : SCP (HMM E-Value=1.6e-14)
Length = 427
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIHLNNN 82
C +CER++ + L TH K+H N
Sbjct: 181 CEICERKFKYLSNLRTHLKVHKKMN 205
>SB_27631| Best HMM Match : zf-C2H2 (HMM E-Value=0.0041)
Length = 117
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIH 70
CP C R +S++ L++H + H
Sbjct: 94 CPQCPRLFSAQIGLISHLRTH 114
>SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H CP+C++ +S + L H IH N +
Sbjct: 777 HRCPVCKKCFSRASLLKQHSVIHQGNKR 804
>SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 5 VCPMCERRYSSKAALVTHFKIH 70
VCP C R + ++ LV+H + H
Sbjct: 331 VCPECGRAFHARIGLVSHLRTH 352
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,376,733
Number of Sequences: 59808
Number of extensions: 307964
Number of successful extensions: 828
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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