Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00372
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.057
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    24   3.7  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    24   3.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.5  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   8.6  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 30.3 bits (65), Expect = 0.057
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 2   HVCPMCERRYSSKAALVTHFKIH 70
           H+CP C+R +  K  L+ H  +H
Sbjct: 420 HICPTCKRPFRHKGNLIRHMAMH 442



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 2   HVCPMCERRYSSKAALVTHFKIH 70
           H C +CER + + A+L  H   H
Sbjct: 155 HKCVVCERGFKTLASLQNHVNTH 177


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 14  MCERRYSSKAALVTHFKIHLNNN 82
           +CER YS+   L   ++++ NNN
Sbjct: 104 LCERAYSAFQCLREDYEMYQNNN 126


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 14  MCERRYSSKAALVTHFKIHLNNN 82
           +CER YS+   L   ++++ NNN
Sbjct: 117 LCERAYSAFQCLREDYEMYQNNN 139


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   HVCPMCERRYSSKAALVTHFKI 67
           H CP+C ++++ +  +  H K+
Sbjct: 923 HECPVCGQKFTRRDNMKAHCKV 944


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 199  IKRNYKKAKLNRQCSFDYVYDSLKLYCY*ELLKSNLYNFVII 74
            IK+ +    +NR  S DY Y++ KL+     + S   +F +I
Sbjct: 2054 IKKVFFVPTINRTYSIDYEYENGKLHSLRYPMDSAASSFTLI 2095


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 460 LTIALMYSASNIKCCTHYLPTYCNFFAPTYSLVAY 356
           +TI L+Y A  +   + + P    FF+ T  L A+
Sbjct: 285 VTIYLVYFAQQLPAISGHTPLIVIFFSNTLLLTAF 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,689
Number of Sequences: 2352
Number of extensions: 11313
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)