Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00372
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.55
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 31 0.96
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 31 0.96
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 30 1.7
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical ... 29 2.2
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 29 2.2
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 29 2.2
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 29 2.2
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 29 2.9
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 29 2.9
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 29 2.9
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 29 2.9
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 2.9
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 29 3.9
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 29 3.9
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 29 3.9
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 29 3.9
U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 28 5.1
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
protein C09H6.1b protein.
Length = 1309
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H C C RY SK++L H K+HL +
Sbjct: 112 HACHKCPSRYESKSSLANHTKMHLGEKR 139
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
protein C09H6.1a protein.
Length = 1311
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H C C RY SK++L H K+HL +
Sbjct: 112 HACHKCPSRYESKSSLANHTKMHLGEKR 139
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 31.5 bits (68), Expect = 0.55
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H C +C++R+SS + L TH ++H
Sbjct: 564 HRCDICDKRFSSTSNLKTHLRLH 586
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 5 VCPMCERRYSSKAALVTHFKIH 70
+CP+C R +S ++LVTH + H
Sbjct: 195 MCPVCNRPFSQSSSLVTHRRTH 216
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 5 VCPMCERRYSSKAALVTHFKIH 70
+CP+C R +S ++LVTH + H
Sbjct: 136 MCPVCNRPFSQSSSLVTHRRTH 157
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNN 79
H CP CE+++ L H KIH +N
Sbjct: 79 HPCPFCEKKFRYPNKLREHIKIHDSN 104
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 29.5 bits (63), Expect = 2.2
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
HVC +C++ +S ++L H ++H
Sbjct: 524 HVCSVCQKSFSQSSSLNKHLRVH 546
>AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical
protein Y53H1A.2 protein.
Length = 240
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLN 76
H CP C ++Y+S+ L H +H N
Sbjct: 169 HNCPECPKKYTSERRLKHHIVVHRN 193
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHL 73
H+C +C R + K+ LV H +IHL
Sbjct: 624 HLCKICGRGFIEKSHLVRHERIHL 647
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHL 73
H+C +C R + K+ LV H +IHL
Sbjct: 624 HLCKICGRGFIEKSHLVRHERIHL 647
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHL 73
H+C +C R + K+ LV H +IHL
Sbjct: 624 HLCKICGRGFIEKSHLVRHERIHL 647
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H C C +R+ ++ L H +IH NN K
Sbjct: 107 HECDRCGKRFKARGGLQQHMRIH-NNEK 133
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H C C +R+ ++ L H +IH NN K
Sbjct: 173 HECDRCGKRFKARGGLQQHMRIH-NNEK 199
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H C C +R+ ++ L H +IH NN K
Sbjct: 107 HECDRCGKRFKARGGLQQHMRIH-NNEK 133
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H C C +R+ ++ L H +IH NN K
Sbjct: 173 HECDRCGKRFKARGGLQQHMRIH-NNEK 199
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
HVCP C + + K L H IH
Sbjct: 95 HVCPHCNKAFFQKGHLTQHLMIH 117
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
HVCP C + + K L H IH
Sbjct: 144 HVCPHCNKAFFQKGHLTQHLMIH 166
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHL 73
H C +C YSSK L H K HL
Sbjct: 64 HTCEICGAHYSSKIYLNRHMKKHL 87
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIH 70
CP C++ SS +AL TH K H
Sbjct: 191 CPKCDKLLSSPSALYTHKKTH 211
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 265 HICPFCGKSYTQQTYLQKHMTKHADRSK 292
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 269 HICPFCGKSYTQQTYLQKHMTKHADRSK 296
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 265 HICPFCGKSYTQQTYLQKHMTKHADRSK 292
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 269 HICPFCGKSYTQQTYLQKHMTKHADRSK 296
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 269 HICPFCGKSYTQQTYLQKHMTKHADRSK 296
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 265 HICPFCGKSYTQQTYLQKHMTKHADRSK 292
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIHLNNNK 85
H+CP C + Y+ + L H H + +K
Sbjct: 269 HICPFCGKSYTQQTYLQKHMTKHADRSK 296
>U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical
protein B0310.2 protein.
Length = 413
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 2 HVCPMCERRYSSKAALVTHFKIH 70
H CP C ++++ K L+ H K H
Sbjct: 336 HTCPHCHKKFNRKDNLLRHKKTH 358
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 8 CPMCERRYSSKAALVTHFKIH 70
C C R++S + AL TH ++H
Sbjct: 279 CHYCTRQFSQRGALKTHMRLH 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,306,807
Number of Sequences: 27780
Number of extensions: 252911
Number of successful extensions: 619
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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