Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00371
         (670 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17380| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.64 
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_30756| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)           29   2.6  
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_36416| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)           28   6.0  
SB_5817| Best HMM Match : DpmII (HMM E-Value=1.5)                      28   7.9  

>SB_17380| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 727

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 148 GYLVSEILRTRRRQCCLYSLRRHSQNQR 65
           GY++  +LRT R  C     R H QNQ+
Sbjct: 460 GYIILSVLRTLRALCICVGFRAHHQNQK 487


>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3172

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = -2

Query: 573  QRLSFGKLSKTPVYSRLHAILIKQHIRKLWARRKAYLVSDLCRIIVSAYFASIDSYNLNT 394
            QRL + ++ K+       A++++ H+R   ARR+  ++     +I + Y A  D  +   
Sbjct: 2627 QRLQYSEICKS-------AVVLQSHVRAYQARRRFVVMKQAAAVIQTRYHAYRDGASCRL 2679

Query: 393  RYRM 382
            +Y M
Sbjct: 2680 KYNM 2683


>SB_30756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 311

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 654 LSNATLVNNNNTQFQYLKSKMHF-IAQLQRLSFGKLSKTPVYSRLHAILI 508
           +++ATL  NN  ++ Y ++ + F +A    + +G L+ T   SR   +LI
Sbjct: 68  IAHATLSPNNKAKWSYFRNAIRFMVALCTTVGYGDLTPTSTLSRALTMLI 117


>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
          Length = 506

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -2

Query: 492 KLWARRKAYLVSDLCRIIVSAYFASIDSYNLNTRYRMG 379
           +L +  K+Y ++  CR++   Y  S+D+Y +   Y +G
Sbjct: 452 RLSSGEKSYYITKYCRLVTPTYIYSLDNY-MEIEYHIG 488


>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1112

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 259 NKGSTSTENFQEFLFQKRDYFNFDSAKSEETIRFVTSYDYAHPIPRVKIIRVNGREIC 432
           N+   S +    F  ++ DY+N       +T+  +T+Y+Y HPI   K  R   R IC
Sbjct: 59  NQTLDSLQTKTHFYEEQIDYYN---QYIRDTLAGITTYNYNHPIHLYK--RKGNRRIC 111


>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2408

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 485  QSFRICCLIKIACNRLYTGVFDNFPKLNLWSCAIKCIF 598
            +S ++ C+   A  +L  G  +N  KLN+WS A K +F
Sbjct: 898  ESRQVTCICFNANGKLLAGAMEN--KLNIWSSAGKSLF 933


>SB_36416| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 185

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 621 TQFQYLKSKMHFIAQLQRLSFGKLSKTPVYSRLH 520
           T+   L   M   + L RL FGK+S +P  +RLH
Sbjct: 40  TKSSLLIGYMSIASTLGRLVFGKISDSPCINRLH 73


>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
          Length = 2040

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/25 (40%), Positives = 20/25 (80%)
 Frame = -2

Query: 663 QILLSNATLVNNNNTQFQYLKSKMH 589
           ++LL++A+L+N+ NT+   L +K+H
Sbjct: 281 KLLLASASLINSKNTKVNDLNTKLH 305


>SB_5817| Best HMM Match : DpmII (HMM E-Value=1.5)
          Length = 529

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 259 NKGSTSTENFQEFLFQKRDYFNFDSAKSEETIRFVTSYDYAHPIPRVKII 408
           N  S S +NF E   ++RD  N +++K +E +    SY  A+ + R ++I
Sbjct: 2   NNDSQSVKNFLETASKQRDAKNQETSKRQEVLE---SYCSANDVLRAEVI 48


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,307,892
Number of Sequences: 59808
Number of extensions: 410571
Number of successful extensions: 926
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)