Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00369
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.2  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +2

Query: 224 PLYEDHIMPPNHPFHPYLPYHPW 292
           P     +  P  P+H +  Y PW
Sbjct: 474 PSMHGGVCDPYTPWHTFYDYRPW 496


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 547 ELSLQSLHQWPDH 585
           E+ LQ LHQ+P H
Sbjct: 124 EVKLQHLHQFPHH 136


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 173 IPIYICNNLYS*MHSRCP 226
           + +++CNNL+  + SR P
Sbjct: 235 VAVWMCNNLHKALESRNP 252


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 173 IPIYICNNLYS*MHSRCP 226
           + +++CNNL+  + SR P
Sbjct: 235 VAVWMCNNLHKALESRNP 252


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 364 LASVRAVRTTFVGSMMPF 417
           +AS R  R TF+ S +PF
Sbjct: 180 MASTRYARQTFIFSAIPF 197


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 399 GVNDALFNHVYIFIVEGIIPKFISKVF 479
           G+   +FN VY++  +     F+ +VF
Sbjct: 149 GLTSPIFNLVYVYCCDNNFNVFLRQVF 175


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -2

Query: 282 YGRYGWNGWL 253
           +G  GWN W+
Sbjct: 280 FGSVGWNDWI 289


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 449 HHTQIHLQGLPPWQQQQNHQ 508
           HH   H+Q   P   Q +HQ
Sbjct: 165 HHMGHHMQEQHPQHHQPHHQ 184


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 449 HHTQIHLQGLPPWQQQQNHQ 508
           HH   H+Q   P   Q +HQ
Sbjct: 167 HHMGHHMQEQHPQHHQPHHQ 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,011
Number of Sequences: 336
Number of extensions: 3596
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)