Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00369
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   1.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.2  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 461 FGYDALNNEYVNMIEKGIIDPT 396
           FG D LNN ++ M E  +IDP+
Sbjct: 88  FGTDKLNNPFIGMGE-FLIDPS 108


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 560 CNESSEDAMHDNSKKCRL 507
           CN SS D   ++S KC +
Sbjct: 363 CNNSSSDKERNSSFKCSM 380


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 306 KRA*PHGWYGRYGWNGW 256
           KR  P  W G +G + W
Sbjct: 157 KRVPPTNWVGVFGGSAW 173


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +3

Query: 294 VRLFFLWNFTDHSFGSSKQ 350
           +++ + W + D+ FGS ++
Sbjct: 29  LKVIYEWKYIDYDFGSDEK 47


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 306 KRA*PHGWYGRYGWNGW 256
           KR  P  W G +G + W
Sbjct: 157 KRVPPTNWVGVFGGSAW 173


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 428 LHIHC*GHHTQIHLQGLPPWQQQQNHQ 508
           LH H    H Q   Q  P  QQQQ  Q
Sbjct: 814 LHHHQ-STHPQAQAQAQPQQQQQQQQQ 839


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,257
Number of Sequences: 438
Number of extensions: 3822
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)