Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00368
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   2.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 10   PPPTSWSIAPKEFSTSMKLR 69
            PP  +W I   +F+TS K+R
Sbjct: 1335 PPVITWKIKGVQFTTSDKIR 1354


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 207 PTTRRCLYACLLTAQPVSWSLY 272
           P+  +C YACLL    + W +Y
Sbjct: 41  PSLAKC-YACLLMVVKILWVIY 61


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 36  SKGVQYLNEIKDSVVAGFQ 92
           SK ++Y+N + D  VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 36  SKGVQYLNEIKDSVVAGFQ 92
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 36  SKGVQYLNEIKDSVVAGFQ 92
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 512 TVSRGGPANGRIRTAGRP 459
           ++S GGP N  +R+ G P
Sbjct: 78  SLSYGGPVNDDVRSPGTP 95


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 512 TVSRGGPANGRIRTAGRP 459
           ++S GGP N  +R+ G P
Sbjct: 234 SLSYGGPVNDDVRSPGTP 251


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 224 LVCMSANCSARLMEPVYLCEIQCPEVAVGGIYGVL 328
           + C SA CS ++ E  +  +I    V     +G+L
Sbjct: 348 MACSSAGCSQKVAEERHKTDINITTVPSEQQWGIL 382


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 377 PMFIVKAYLPVNESFGFT 430
           P F      P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 394 LHNEHRCTCHLGLF 353
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 204 IPTTRRCLYACLLTAQPV 257
           +PTT  CL   LL +Q V
Sbjct: 21  LPTTHNCLKKVLLLSQIV 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,317
Number of Sequences: 336
Number of extensions: 3958
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)