Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00368
(632 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 165 4e-42
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 165 4e-42
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 107 1e-24
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 89 4e-19
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 38 0.001
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 27 1.7
SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces pom... 27 1.7
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 3.0
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 26 3.9
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 3.9
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 5.2
SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 6.9
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 25 6.9
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 6.9
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 25 9.1
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 165 bits (402), Expect = 4e-42
Identities = 74/119 (62%), Positives = 89/119 (74%)
Frame = +2
Query: 257 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 436
+ EPV+L EIQ E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESFGFT +
Sbjct: 724 IQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGE 783
Query: 437 LRSNTGGQAFPQCVFDHWQVLPWRPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 613
LR T GQAFPQ VFDHW + P +P SKP +V E RKRKGLKE +PD T+Y D+L
Sbjct: 784 LRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
Score = 122 bits (294), Expect = 4e-29
Identities = 59/95 (62%), Positives = 66/95 (69%)
Frame = +3
Query: 9 TAPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHR 188
T N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR RFNI DV LH DAIHR
Sbjct: 641 TGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHR 700
Query: 189 GGGQIIPTTRRCLYACLLTAQPVSWSLYIFVKFSV 293
GGGQIIPT RR +YA L A P+ V+ V
Sbjct: 701 GGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQV 735
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 165 bits (402), Expect = 4e-42
Identities = 74/119 (62%), Positives = 89/119 (74%)
Frame = +2
Query: 257 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 436
+ EPV+L EIQ E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESFGFT +
Sbjct: 724 IQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGE 783
Query: 437 LRSNTGGQAFPQCVFDHWQVLPWRPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 613
LR T GQAFPQ VFDHW + P +P SKP +V E RKRKGLKE +PD T+Y D+L
Sbjct: 784 LRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
Score = 122 bits (294), Expect = 4e-29
Identities = 59/95 (62%), Positives = 66/95 (69%)
Frame = +3
Query: 9 TAPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHR 188
T N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR RFNI DV LH DAIHR
Sbjct: 641 TGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHR 700
Query: 189 GGGQIIPTTRRCLYACLLTAQPVSWSLYIFVKFSV 293
GGGQIIPT RR +YA L A P+ V+ V
Sbjct: 701 GGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQV 735
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 107 bits (257), Expect = 1e-24
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 14/142 (9%)
Frame = +2
Query: 227 VCMSA--NCSARLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAY 400
VC S+ S RLMEPVY+ E+ P ++ IY +L RRRGHV ++ G+P+++V+A
Sbjct: 828 VCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRAL 887
Query: 401 LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPCEPQSKP------------YNVV 544
+PV +S GF DLR +T GQA Q VFDHWQV+P P + KP + +
Sbjct: 888 IPVIDSCGFETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKSIKPKPLEPARGSDLARDFL 947
Query: 545 QETRKRKGLKEGLPDLTQYLDK 610
+TR+RKGL E + T+Y D+
Sbjct: 948 IKTRRRKGLVEDV-STTRYFDQ 968
Score = 79.0 bits (186), Expect = 5e-16
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +3
Query: 30 DCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIP 209
D K V LN +K+ + GFQW +EG + +E +R V F + DV L + I+RGGGQIIP
Sbjct: 766 DVDKNV--LNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIP 823
Query: 210 TTRRCLYACLLTAQP 254
T RR Y+ LTA P
Sbjct: 824 TARRVCYSSFLTASP 838
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 89.4 bits (212), Expect = 4e-19
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +2
Query: 248 SARLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 427
S RLM +Y C++Q +G +YGV+++RRG V +E GTP FIVKA +PV ESFGF
Sbjct: 859 SPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGF 918
Query: 428 TADLRSNTGGQAFPQCVFDHWQVLPWRP 511
++ T G A+PQ +F +++L P
Sbjct: 919 AVEILKRTSGAAYPQLIFHGFEMLDENP 946
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +2
Query: 257 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 436
++EP+ I P GG+ G L++R+ + + F ++A +P+N F +++D
Sbjct: 674 VLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSMFSYSSD 731
Query: 437 LRSNTGGQ 460
+R+ T G+
Sbjct: 732 IRALTKGK 739
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 214 VVGMIWPPPLWMASVWSVTS*MLNRTPRKFSSAITPSLAA 95
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 190 PLWMASVWSVTS*MLNRTPRKFSSAITPSLAAHWNPATTESLISLRY 50
P W+A V ++ S + P FSS + +L A+ N + + + Y
Sbjct: 43 PFWLAEVLAINSFVSIHMPAPFSSVVRNALKANPNSVSIRDITTHYY 89
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 PNHSNN*KMLVCMSANCSARLMEPVYLCEIQC---PEVAVGGI 316
P+H+N + + +S N RLMEP EIQC P+ A+G I
Sbjct: 469 PSHANEDMVRLRISRNGEERLMEP--KDEIQCLNLPKSALGTI 509
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/79 (21%), Positives = 35/79 (44%)
Frame = +2
Query: 191 WWPNHSNN*KMLVCMSANCSARLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 370
W+P + + +S S++ + + E E + ++ LNR++ + F Q+
Sbjct: 234 WFPKMETSLTLDELLSLFASSKELTSLVPNEKNPKEYILKLLFDHLNRKKTNNFNTHQIL 293
Query: 371 GTPMFIVKAYLPVNESFGF 427
++ A L V +FGF
Sbjct: 294 SQSDVVLNALLSVATAFGF 312
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 413 ESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPCEPQSKP 532
E G ++D+ S A P C ++ PW P+S P
Sbjct: 1482 ECVGLSSDIVSTLSNYACPDCCSKEGKLYPWN-TRPRSTP 1520
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 212 CWNDLATTSMDGISMECYIIDVESNTTQI 126
CW++L+TTS + + II + TT I
Sbjct: 211 CWDELSTTSPESSKVSEPIIQDNTQTTHI 239
>SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 6.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = -1
Query: 230 IQASSSCWND-----LAT--TSMDGISMECYIIDVESNTTQILFSHNSFLSGPLESSHNR 72
+Q S S +ND LA ++ + + Y++ E + Q + SFL L S HN+
Sbjct: 203 LQHSDSSFNDKFLLLLANIPVTVSNVEVLLYLLQQEESLAQFDLNGKSFLYHMLVSLHNQ 262
Query: 71 VLN 63
V N
Sbjct: 263 VTN 265
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 459 RPSRSAYSTIGRSSPGDRANLRASPTTL 542
+P T G SSPG ANL A P +L
Sbjct: 43 KPKSRKRPTSGVSSPGIFANLAAKPVSL 70
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 51 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 143
YL+ + +AGFQ G+ ++N +GVR
Sbjct: 248 YLSPVVRRYLAGFQSGFLHGLKTKDNSKGVR 278
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 426 LLPICVPTPADRPSRSAYSTIGRS 497
+LP+ + TPA P + YS G S
Sbjct: 109 VLPLSINTPAQWPEKEVYSLQGTS 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,918,711
Number of Sequences: 5004
Number of extensions: 63940
Number of successful extensions: 170
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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