Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00368
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 218 2e-57
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 218 2e-57
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 99 3e-21
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 99 3e-21
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.042
AF098992-12|AAC67453.2| 328|Caenorhabditis elegans Hypothetical... 30 1.6
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 28 4.8
Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical pr... 27 8.4
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 27 8.4
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 27 8.4
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 27 8.4
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 27 8.4
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 218 bits (533), Expect = 2e-57
Identities = 99/120 (82%), Positives = 106/120 (88%)
Frame = +2
Query: 254 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 433
RL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTA
Sbjct: 733 RLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTA 792
Query: 434 DLRSNTGGQAFPQCVFDHWQVLPWRPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 613
DLRSNTGGQAFPQCVFDHWQVLP P E +KP +V +TRKRKGLKEG+P L YLDK+
Sbjct: 793 DLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
Score = 146 bits (355), Expect = 9e-36
Identities = 63/84 (75%), Positives = 76/84 (90%)
Frame = +3
Query: 3 EGTAPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAI 182
+GT PN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH DAI
Sbjct: 649 DGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAI 708
Query: 183 HRGGGQIIPTTRRCLYACLLTAQP 254
HRGGGQIIPT RR YA +LTA+P
Sbjct: 709 HRGGGQIIPTARRVFYASVLTAEP 732
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 218 bits (533), Expect = 2e-57
Identities = 99/120 (82%), Positives = 106/120 (88%)
Frame = +2
Query: 254 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 433
RL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTA
Sbjct: 733 RLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTA 792
Query: 434 DLRSNTGGQAFPQCVFDHWQVLPWRPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 613
DLRSNTGGQAFPQCVFDHWQVLP P E +KP +V +TRKRKGLKEG+P L YLDK+
Sbjct: 793 DLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
Score = 146 bits (355), Expect = 9e-36
Identities = 63/84 (75%), Positives = 76/84 (90%)
Frame = +3
Query: 3 EGTAPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAI 182
+GT PN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH DAI
Sbjct: 649 DGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAI 708
Query: 183 HRGGGQIIPTTRRCLYACLLTAQP 254
HRGGGQIIPT RR YA +LTA+P
Sbjct: 709 HRGGGQIIPTARRVFYASVLTAEP 732
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 98.7 bits (235), Expect = 3e-21
Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Frame = +2
Query: 254 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 433
RLMEP Y E+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF
Sbjct: 830 RLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFET 889
Query: 434 DLRSNTGGQAFPQCVFDHWQVLPWRPCEP---------QSKPY---NVVQETRKRKGLKE 577
DLR +T GQAF F HWQ++P P + Q P+ + +TR+RKGL E
Sbjct: 890 DLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 949
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 TAPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTD 176
T PNIL+D + + L+ +++S+V GFQWA +EG + EE +R V+F + D + T+
Sbjct: 744 TGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATE 803
Query: 177 AIHRGGGQIIPTTRRCLYACLLTAQP 254
++RGGGQ+IPT RRC Y+ L A P
Sbjct: 804 PLYRGGGQMIPTARRCAYSAFLMATP 829
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 98.7 bits (235), Expect = 3e-21
Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Frame = +2
Query: 254 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 433
RLMEP Y E+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF
Sbjct: 705 RLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFET 764
Query: 434 DLRSNTGGQAFPQCVFDHWQVLPWRPCEP---------QSKPY---NVVQETRKRKGLKE 577
DLR +T GQAF F HWQ++P P + Q P+ + +TR+RKGL E
Sbjct: 765 DLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 824
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 TAPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTD 176
T PNIL+D + + L+ +++S+V GFQWA +EG + EE +R V+F + D + T+
Sbjct: 619 TGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATE 678
Query: 177 AIHRGGGQIIPTTRRCLYACLLTAQP 254
++RGGGQ+IPT RRC Y+ L A P
Sbjct: 679 PLYRGGGQMIPTARRCAYSAFLMATP 704
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 66.5 bits (155), Expect = 1e-11
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Frame = +2
Query: 218 KMLVCMSANCSA-------RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 376
+M+ + A+CSA RL+ +Y C + A+G ++ VL++R+ V E T
Sbjct: 734 QMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINEAT 793
Query: 377 PMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRP 511
+F V + +PV ESF F LR T G A Q F HWQV+ P
Sbjct: 794 NLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/55 (41%), Positives = 27/55 (49%)
Frame = +2
Query: 347 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRP 511
V E T +F V + +PV ESF F LR T G A Q F HWQV+ P
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 257 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 436
L+EP+ E P G + L +R + G I +A P+++ FG+T++
Sbjct: 642 LLEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSE 699
Query: 437 LRSNTGGQ 460
LRS T G+
Sbjct: 700 LRSLTEGK 707
>AF098992-12|AAC67453.2| 328|Caenorhabditis elegans Hypothetical
protein F53C3.1 protein.
Length = 328
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 497 LPWRPCEPQSKPYNVVQETRK--RKGLKEGLPDLTQYLDKL 613
LPWR C+ +++ + + TRK R L +G+P T L+K+
Sbjct: 231 LPWRHCKVKNEVLKIKENTRKDNRAALYKGIPQ-TSELNKI 270
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 61 KLRTLLWLDSSGPLRKELWLKRICVVFDST 150
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 61 KLRTLLWLDSSGPLRKELWLKRICVVFDST 150
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 120 EENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPVS 260
+ NL +++ TLH +HR IP R CLY C L AQ ++
Sbjct: 309 KRNLCEKLLDLFQDTLHDHNVHR-----IPVLR-CLYICSLAAQNIT 349
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 499 EDLPMVEYALREGLSAGVGTQIGSKTERLID 407
ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 233 EDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
>Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical
protein F48C5.1 protein.
Length = 264
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 151 MLNRTPRKFSSAITPSLAAHWNPATT 74
M++ P + S +TP + A+W P T
Sbjct: 169 MISEPPVRVDSVVTPPVCAYWPPVVT 194
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 589 VWETFLQSFPLSRFLYN-VVGLALRFARSPGED 494
VWE LQ L L + +V LAL F R PGED
Sbjct: 79 VWEA-LQDVTLVILLVSAIVSLALSFYRPPGED 110
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 589 VWETFLQSFPLSRFLYN-VVGLALRFARSPGED 494
VWE LQ L L + +V LAL F R PGED
Sbjct: 79 VWEA-LQDVTLVILLVSAIVSLALSFYRPPGED 110
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 589 VWETFLQSFPLSRFLYN-VVGLALRFARSPGED 494
VWE LQ L L + +V LAL F R PGED
Sbjct: 79 VWEA-LQDVTLVILLVSAIVSLALSFYRPPGED 110
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 589 VWETFLQSFPLSRFLYN-VVGLALRFARSPGED 494
VWE LQ L L + +V LAL F R PGED
Sbjct: 79 VWEA-LQDVTLVILLVSAIVSLALSFYRPPGED 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,718
Number of Sequences: 27780
Number of extensions: 378302
Number of successful extensions: 1188
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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