Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00367
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.1  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 190 FSLKLIKFQVKFAMESFFCCLTILFYIDMKKKYV*MLKLCL 68
           FS+     +VK  M S++  LT L Y +  +KY  +   CL
Sbjct: 23  FSVIYSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWLNVCCL 63


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 581 PFRGELKDALEIGRILTPTSFLMRK 507
           PF+  +KD L + + L  T  L++K
Sbjct: 70  PFKAYIKDPLTLAQGLVSTEMLLKK 94


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 93   MFKCLSCVYK 64
            +FKC+ C YK
Sbjct: 1084 LFKCMICTYK 1093


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 93   MFKCLSCVYK 64
            +FKC+ C YK
Sbjct: 1084 LFKCMICTYK 1093


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 149 GKLFLLFNDSFLYRHEKE 96
           G LFLL  DS+L  + KE
Sbjct: 15  GFLFLLICDSYLKIYHKE 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,964
Number of Sequences: 336
Number of extensions: 3135
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)